Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00789 ATGGTGCGAAATGACAACAGCAAAGACAAGGAGAGAGACCTCGAGTTCTCCTTCGATCACAACGACGAGGATGTCGACCAACAGGATATTGAAGCCCTCAAGTACGAGAGTGAGAGTAGCAGTGAGTATCATAGtgaggatgatgatggtggtggtgatgatgataatCGGAGACTACACCCCAACTCTTTCTCTTCTCAGCAGTGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCGAATTTGGAGTCAGTTCTGCGAGGGCCAAGTTTTATATATTCTAGTTTTGGTAATCGTTCAAAGAGTAGCTTAGACATTGATGGAAAGACTCCTTTTCTATCTGCTCCTGATGGCATTAGTCAATCAACTTGGTGGGAGAAAGCTTCAGTACAGCGCCACTTTTCTGGAGAATTGCCCATTGGATATGGATGCACCTTTTCTCAAACAGTTTTCAATGGCATTAATGTGATGGCTGGAGTAGGTCTACTATCTACACCATATACAGTGAATCAAGCTGGGTGGATGAGCATGGCTGTGATGATTTTTTTTGCAGTTGTTTGTTGTTATACAGCCACCCTTATGAGATACTGCTTTGAGAGCAGAGAAGGAATCAGTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGAATTATTGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCAATAGTCTGTTTCCTGGTGCATCCTTAGATTTGGGTAGTTTCCAGTTAGACTCTCTGCATTTGTTTGGAATTTTGACAGCACTTATTATTCTACCGACTGTTTGGTTGAAGGATCTTCGTATAATCTCTTATCTATCAGCTGGAGGGGTTGTTGCAACACTCCTGATTGTTATCTGTGTGTTTTGTGTTGGAACGATAGACAGTGTTGGATTCCATCAAACTGGTCCATTGGTAAAATGGAATGGCATTCCATTTGCTATTGGTGTTTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCACTAATAACATGTTTTGTTTTGTGTATTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGAAGGAACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTTATTAACCCATTAACTAAATATGCTTTGTTGATGAACCCGCTGGCAAGGAGTCTAGAAGAGTTGCTGCCAGAGAGAATTTCATCTACATATTGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGTTGCCTTTCTGGTTCCTTTTTTTGGTAAGATTTAG 1428 0.3964 MVRNDNSKDKERDLEFSFDHNDEDVDQQDIEALKYESESSSEYHSEDDDGGGDDDNRRLHPNSFSSQQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFGNRSKSSLDIDGKTPFLSAPDGISQSTWWEKASVQRHFSGELPIGYGCTFSQTVFNGINVMAGVGLLSTPYTVNQAGWMSMAVMIFFAVVCCYTATLMRYCFESREGISTYPDIGEAAFGRYGRIIVSIILYTELYSYCVEFITLEGDNLNSLFPGASLDLGSFQLDSLHLFGILTALIILPTVWLKDLRIISYLSAGGVVATLLIVICVFCVGTIDSVGFHQTGPLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFVLCILIYGSVAIMGFLMFGEGTLSQITLNMPPGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPERISSTYWCFILLRTALVASTVCVAFLVPFFGKI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00789 475 MobiDBLite consensus disorder prediction 61 77 - -
Cca02g00789 475 MobiDBLite consensus disorder prediction 1 60 - -
Cca02g00789 475 Pfam Transmembrane amino acid transporter protein 151 475 IPR013057 -
Cca02g00789 475 MobiDBLite consensus disorder prediction 1 77 - -
Cca02g00789 475 PANTHER OS05G0424000 PROTEIN-RELATED 41 473 - -
Cca02g00789 475 PANTHER AMINO ACID TRANSPORTER AVT1A 41 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00789 Cca-Chr2 21078132 21085461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00789 4 474 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.257 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00789 K15015 - gmx:100790344 805.438