Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00786 ATGAGGACAATGAAAAAAGGTGCCTCAAAGGGTTCAAAGAAGCCAACCTCATTCACGAAGACGTTGACACAATCGAACACGAAAAATGGCGATGGATTCTCCATGCCACGATACCGTGTGTCGTTCTATGACTCAGAGCTTGACGATGACAACAACGGAGACACCTTGGAGGATTTAAAGAAGTTGTCATCGTTTGCAAAGACACTAATGCAGTCATACACAAACAATGGCGATGGGTTCTCCATGTCGTAG 252 0.4484 MRTMKKGASKGSKKPTSFTKTLTQSNTKNGDGFSMPRYRVSFYDSELDDDNNGDTLEDLKKLSSFAKTLMQSYTNNGDGFSMS 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00786 83 MobiDBLite consensus disorder prediction 1 36 - -
Cca02g00786 83 MobiDBLite consensus disorder prediction 10 32 - -
Cca02g00786 83 PANTHER AUXIN RESPONSE FACTOR 16 51 82 - -
Cca02g00786 83 PANTHER AUXIN RESPONSE FACTOR 16 6 39 - -
Cca02g00786 83 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 82 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cca02g00786 83 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 39 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00786 7 48 B3 DNA Binding Superfamily AT2G28350 52.381 1.30e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00786 - K15449 mnt:21385162 44.669