Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00779 ATGGATTCCCATACCCATCATCATCACCAGGGTCACCAACAGAACCAATCCTCTTCTTCTGGGTTGCTTCGTTTTCGCTCTGCACCCAGTTCGCTGCTTTCGAATCTCACACCCTCTTTTTACGGTGGTGGTTCTAGCAGCTTGGAAGGAaacaacagcagcaacaacaacgacaaGGATTTGAGTTCGATGAATTCGCATAAAGGGTATGGTGTGGGGTTGCCACCTCACTATCCGAGGCATGGTTCTTCTGCTGGTGCTGCTACTTCGAGTTCTGCTATGGAGGGGTCTTATAATGGGTTAATGGGGATGGATCATGAAGTGCCACACAAGGGCTTTGGATCAACTCTTCTAAGGCAGAGTAGCTCACCTGCTGGCATTTTCTCCAATAACAACATTTCCTTTCAAAATGGGTTTGCCACCATGAAAGGTGTTGGTAACTATGGTGGGGTGAATGGCAGTAATGGTGAACTTAGTCCATGCATTAACAGATTGAAGAATCAGATTAGCTTTTCACCAAGAAATGCCACTTCCCTTGGAATTTTGTCACAGATCTCAGAAATAGAGAGTGAAGACATTGATGCAACAAGCCCTGATGATGATAGGAGGCATGGAGGTAGTGATACTCAACATTATGGCCCTGGATTCCCCTATGGTTCTTGGAATGGCACTCCACAACTCTCAGAAAATCCCAGTGGCTTGAAAAGAGGGAGAAGTGGCAATGAAAAGTTATTTTCTGATGTTCAGAATGGAGAGCTAGGAAACCAAGTTAGTATGTTATCACATCACTTGAGTTTGCCAAAAACTTCAGCAGAGATGATTACTATGGAGAAGTTGCTTCAGTTCCCTAATTCTGTTCCATGTAAAATCAGAGCAAAGAGAGGTTGTTCTACTCATCCACGAAGTATTGCTGAAAGGATGAGAAGAACATAG 933 0.4298 MDSHTHHHHQGHQQNQSSSSGLLRFRSAPSSLLSNLTPSFYGGGSSSLEGNNSSNNNDKDLSSMNSHKGYGVGLPPHYPRHGSSAGAATSSSAMEGSYNGLMGMDHEVPHKGFGSTLLRQSSSPAGIFSNNNISFQNGFATMKGVGNYGGVNGSNGELSPCINRLKNQISFSPRNATSLGILSQISEIESEDIDATSPDDDRRHGGSDTQHYGPGFPYGSWNGTPQLSENPSGLKRGRSGNEKLFSDVQNGELGNQVSMLSHHLSLPKTSAEMITMEKLLQFPNSVPCKIRAKRGCSTHPRSIAERMRRT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00779 310 MobiDBLite consensus disorder prediction 44 92 - -
Cca02g00779 310 MobiDBLite consensus disorder prediction 1 22 - -
Cca02g00779 310 MobiDBLite consensus disorder prediction 189 240 - -
Cca02g00779 310 MobiDBLite consensus disorder prediction 221 235 - -
Cca02g00779 310 MobiDBLite consensus disorder prediction 44 64 - -
Cca02g00779 310 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 310 - -
Cca02g00779 310 PANTHER TRANSCRIPTION FACTOR BHLH130 14 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00779 Cca-Chr2 20638498 20642461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00779 1 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 39.766 1.89e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00779 - - ccaj:109791582 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00779 02 20638498 20642461 Cca02g00779 02 20638498 20642461 ECH
Cca02g00779 02 20638498 20642461 Cca10g00357 10 3776902 3780272 ECH
Cca02g00779 02 20638498 20642461 Cca04g00556 04 5506554 5510904 ECH
Cca03g02001 03 40130575 40133282 Cca02g00779 02 20638498 20642461 PCT