Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00776 ATGGACGATATTCAAGGATACATACAAATATTCCTTGTTTGCATAGCTTCAACAATATTGCTCCGAGCCGTATTCAAAGCTTCAAAATACCACCTTCCACCTAGTCCATTGGCCTTACCAGTGATTGGACACTTCTACTTGCTAAAACCACCCCTTCACAGATCTTTCCAGAAGCTCTCAAATCGCTATGGACCCTTGATTCATCTCTACCTCGGCTCCACTCCCATTGTAGTTGTTTCCTCAGCAGAAACAGCCAAAGAGATCTTCAAAACCCACGAACTTTCCTTCTCCAACCGACCAGCAAATGCTGCCATAAGCTACCTCACTTATGACTCATCCGATCTAGGGTTTTCCCCTTATGGAACCTTCTGGAAGTTCATGAAGAAGCTTTGCATGTCAGAGCTTCTCAATGGGAGGATGCTGGATCAACTCCTACCCATCAGGCAAGAAGAGATAAACAGGTTTGTGGCGATGATAAAGAAGAAAGGTGAAGTGTGCCAGGGTGTGAATGTTGGAGAGGAGCTTTTGAAGTTGACGAACAGCATAGTGATGAGAATGGCCGTAAGCAAGAGCTGTTTAAACACTGATGATGAGGCTCACAAGGTGGTGGAAAGGGTGAAGGAGTGTGCCGTGTTGAGTGGAAGGTTTAACCTAGCAGATTATTTTTGGTTCTGTAAGGGGTTGGATCTTCAGGGAATTGGGAAGAGGCTAAAGGAGGTTCGTGGCAGGTTTGACACCATGATGGAGATTATCATTAGGGAGCATGAAGATTCGAGAGATAAATCGAGTGTGGCAAAAGATGTTCTTGATGCTCTTTTGAGTATTTCTGAAGATCAAAGCTCAGAGGTGAAAATAACCAGAGACAACATCAAAGCCTTCTTGGTGGATATGTTCACAGGAGGGACAGATACAACGGCAGTTACTCTAGAATGGTCACTGGCAGAACTAATTAACCATCCAACAGTGATGGAGAAAGCAAGGAAGGAAATTGACTCCATAATTGGCAAAGACAGAATAGTAACGGAATTGGACATAGAAAACCTTCCTTATCTCCAAGCCATAGTGAAGGAGACACTGAGGCTTCACCCTCCATCGCCATTTGTATTGAGAGAGTCAACTAAAGATTGCATCATTGTTGGATATGACATTCCAGCAAAGACTCAGGTTTTCACCAATGTGTGGGCCATTGGAAGGGATCCAAAGCATTGGGATAACCCTCTTGAGTTTAGGCCTGAAAGGTTTCTTAGCAAAGATGATGAGACAGGAAAAATAATAGGTCAAGTTGATGTGAGGGGACAACATTATCAGTTTTTGCCTTTTGGGAGTGGAAGAAGAGGGTGTCCTGGAACTTCACTAGCACTAAAGGTTGCTCACACCACCCTTGCTGCTATGATCCAATGCTTTGAATGGAAGGGTGAAGAAGAAGAAAATGGAGGGAATTGTGGTAGCATTGATATGAAAGAGGGACCTTCATTTATTCTTTCAAGGGCTGAACCCCTGATTTGTCTCCCAAAACCAAGACTTGTGCCATTCCCTTTGTGTTATGCTTGCTAA 1554 0.4376 MDDIQGYIQIFLVCIASTILLRAVFKASKYHLPPSPLALPVIGHFYLLKPPLHRSFQKLSNRYGPLIHLYLGSTPIVVVSSAETAKEIFKTHELSFSNRPANAAISYLTYDSSDLGFSPYGTFWKFMKKLCMSELLNGRMLDQLLPIRQEEINRFVAMIKKKGEVCQGVNVGEELLKLTNSIVMRMAVSKSCLNTDDEAHKVVERVKECAVLSGRFNLADYFWFCKGLDLQGIGKRLKEVRGRFDTMMEIIIREHEDSRDKSSVAKDVLDALLSISEDQSSEVKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKARKEIDSIIGKDRIVTELDIENLPYLQAIVKETLRLHPPSPFVLRESTKDCIIVGYDIPAKTQVFTNVWAIGRDPKHWDNPLEFRPERFLSKDDETGKIIGQVDVRGQHYQFLPFGSGRRGCPGTSLALKVAHTTLAAMIQCFEWKGEEEENGGNCGSIDMKEGPSFILSRAEPLICLPKPRLVPFPLCYAC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00776 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 512 - -
Cca02g00776 517 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 SUPERFAMILY Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 Pfam Cytochrome P450 33 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cca02g00776 517 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00776 517 PANTHER CYTOCHROME P450 93A2 4 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00776 Cca-Chr2 20410887 20415584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00776 1 504 Cytochrome P450 AT5G06900 46.457 8.58e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00776 K24188 - gmx:100811919 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00776 02 20410887 20415584 Cca02g00776 02 20410887 20415584 ECH