Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00774 ATGCATGACCTAATACATGACATGGGTAAGGAGATTGTTAAAGAAGAAGCGTGGAATGAAGCTGGTGAACGTAACAGATTTTGGCATCACGAAGATGTTCTTCAAGTGCTAGCTCATAATAATGGAAGTAGCAAAATTCAAGGAATAATGCTTGATCCCCCTCAAAGAGAAGAAATTAATTGTATCAATGTTGTATTTGAGAAGATGCAAAATCTGAGAATTCTCATTGTCCGTAATACAAGCTTTTCACAAGTGCCTTCTTTTCTCCCAAATAACTTAAGGCTACTTGATTGGAAGCATTACCCTTCACAATCTTTCCCATCAAATTTTCATCCCAGGAAAATTTGGGCCTTCAATTTACGTGGAAGTCCTATACTTGAACTGGAAAATTCATTTCAGAGATTTCAAAATTTGACTTACATGAATATCTCGTATTGTCATATGGTAATTACTAAATTTCAAAATGTGTCTGGGCCCAATAATTTAAGAGAATTGAGGCTTGATGGATGCAAGAAATTGGTTAGCATTCATGAATCAGTTGGACATCTGACTAACCTCCTTTTCCTAAGTGCTTCAGAATGCATTCAACTCCAAAGTTTTGTGCCAACAATTTATTTACCATCTCTCGAATACCTTTGCTTTAACTTTTGTCGGAAACTCTCACATTTACCAGAGATCATGGAAATAATGGATAAGCCATTAAAGATTGATATGATATATACGTCTATTGAAGAACTTCCAGAATCCATCAAAAATCTTATTGGGCTTAATTATCTTGACATTACAGGTTGTAAGGGACTCCAACATTTACCAAGTAGCCTATTTATGCTTCCAAATTTTGTCACATTAAAAATTCGAGAATGTTGTCAACTTGGAGTGTCTTTTAGAAGGATCAGAGCAAGCCATTCAACATGCTCAAAGCTAGAGACATTACATTTCGGCAATGCTGATCTATTAAACGAAGATGTCCATAGGATTATTCACAATTTTCCTAACTTAAAAGACTTAAATGTTTCAGAAAACAAATTTGTGTCTTTCCCAACAAGCATTATAGAATGTAATAAGTTGACGAGACTTGACGTGAGGTTTTGTGCGAAGCTCCAAGAACTTCCAGAACTTCCATTAAGTGTTGAGGAAGTAGATGCAAGTTTCTGCAATTCCTTAACATGGGAGACATCAAACATGTTATGGACTCAGGTGTGTAAAGAGAAGGAGAGATTACAAGTCATAATGCCAAAGACAAAGATTCCTGAATGGTTTGACTATGTTAGCGAGGAAGGGTTTCCATTTTTTGAGGCTCGTGGGAAGTTCCCTTCAGTTGCTTTAGCGTTTGTGTTTGGGGAAGAGGATCCCATGATTCAGCGACCATATTCAGATGGCATTTCTTTTGGTGCAAGTTTATTTTAG 1407 0.3646 MHDLIHDMGKEIVKEEAWNEAGERNRFWHHEDVLQVLAHNNGSSKIQGIMLDPPQREEINCINVVFEKMQNLRILIVRNTSFSQVPSFLPNNLRLLDWKHYPSQSFPSNFHPRKIWAFNLRGSPILELENSFQRFQNLTYMNISYCHMVITKFQNVSGPNNLRELRLDGCKKLVSIHESVGHLTNLLFLSASECIQLQSFVPTIYLPSLEYLCFNFCRKLSHLPEIMEIMDKPLKIDMIYTSIEELPESIKNLIGLNYLDITGCKGLQHLPSSLFMLPNFVTLKIRECCQLGVSFRRIRASHSTCSKLETLHFGNADLLNEDVHRIIHNFPNLKDLNVSENKFVSFPTSIIECNKLTRLDVRFCAKLQELPELPLSVEEVDASFCNSLTWETSNMLWTQVCKEKERLQVIMPKTKIPEWFDYVSEEGFPFFEARGKFPSVALAFVFGEEDPMIQRPYSDGISFGASLF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00774 468 Gene3D Ribonuclease Inhibitor 236 408 IPR032675 -
Cca02g00774 468 Gene3D Ribonuclease Inhibitor 55 235 IPR032675 -
Cca02g00774 468 SUPERFAMILY L domain-like 50 391 - -
Cca02g00774 468 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 451 IPR044974 GO:0006952
Cca02g00774 468 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00774 Cca-Chr2 20367393 20369300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00774 1 291 WRKY Transcription Factor Family AT4G12020 33.876 9.33e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00774 - - gmx:100801890 604.364