Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00769 ATGAGTTCTTCTCAAGCAGCAGCAAAGCCAAACCAAGAGGACTACAAGTTGAAGGACACAAAGCCAGAACTTGGAGAGCGTTGGCCACATGGAGGGCAACGTGGAGGGAGTGGTTGGATCTACAGTGAGAGAGCCACAAGCACTTATGACTTGGTGGAGCAAATGTTCTACCTCTATGTTCGCGTTGTGAAGGCCAAGGACCTTCCACCAAACCCTGTCACCAGCAACATTGACCCTTATGTTGAGGTCAAGGTTGGTAACTACAAGGGCAAAACAAGGCACTTTGAGAAGAAGACCAACCCTGAGTGGAAGCAGGTTTTTGCATTCTCAAAGGAGAAGATTCAGTCCTCGGTTGTTGAGGTTTTTGTGAGGGACAAAGATATGGTGGCTAGAGATGAGTACATTGGGAAAGTGGAGTTTGACATGCATGAAGTTCCAACAAGGGTTCCCCCAGATAGCCCTTTAGCTCCTCAGTGGTATAGGTTGGAGAATCTGAGAGGGGAAACAAGGAGTAGAGGAGAAATCATGCTTGCTGTTTGGATGGGGACACAAGCTGATGAAGCATTTCCTGAGGCATGGCATTCAGATTCAGCTTCAGTTAAGGGAGAGGGTGTTTATAATATAAGGTCAAAGGTTTATGTTAATCCTAAATTATGGTATCTCAGGGTTAATGTGATTGAAGCTCAAGATGTTGAGCCTAATGACAAAAGCCAGCCACCCCAAGTTTTTGTTAAGGGTCAAGTTGGACAGCAAGTGCTTAAAACTAAGTTGTGTCCAACAAAAACACCAAACCCAATGTGGAATGAGGATTTGGTGTTTGTCGCAGCAGAACCCTTTGAGGAACAGCTTGTGCTAACAGTGGAGAATAAGGCCTCTCCCGGGAAAGATGAGGTTGTGGCTAAAATAAGTTTGCAACTTAACAAGTTTGAGATTCGTTTGGATCACCGACCAGTGCACTCACATTGGTACAACCTTGAGAGGTTTGGCTTTGGTGTGTTGGAGGGTGACAAGAGGAATGAGACAAAGTTCTCGAGTAGGATTCACCTAAGGGTGTGTCTTGAGGGTGCTTATCATGTGCTGGATGAATCCACAATGTATATTAGTGACACAAGGCCAACTGCTAGACAGCTTTGGAAGCAACCAATTGGGATTCTTGAAGTGGGGATATTGAGTGCTCAAGGGCTCCAATCTATGAAGACAAACAATGGTAAAGGTTCAACAGATGCATATTGTGTGGCCAAGTATGGTCAGAAATGGGTGAGAACTAGGACAATCACCGAGAGCTTCAATCCAAAGTGGAATGAGCAATACACATGGGAAGTGTATGACCCTTGCACTGTCATAACTTTTGGGGTCTTTGACAACAGCCATTTGGGAGGATCTCAGCAAGGAAGTGGAGCCAAAGTTGACTCAAGAATTGGCAAGGTGAGGATTCGTTTGTCTACATTGGAAATGGATAGGATCTACACTAACTCATACCCTCTACTTGTTCTGAAACCCTCTGGATTGAAGAAGATGGGAGAACTTCAATTGGCTATTCGTTTCACATGTCTCTCCATGGCTCACATAATCTACCTTTATGGACACCCTTTGTTGCCAAAGATGCATTACTTGCATCCATTCACTGTGAACCAGTTAGACAGTTTGAGGTACCAAGCTATGAACATTGTGGCAGTTAGGCTTGGAAGGGCAGAACCACCTCTTAGGAAAGAGGTTGTGGAGTACATGCTTGATGTGGACTCTCACATATGGAGCATGAGAAGAAGCAAGGCCAATTTCTTCAGAATTGTGTCACTCTTTTCAGGTGCAATATCTATGAGTAAGTGGCTAGGTGAGGTGGAAAAGTGGAAGAATCCAGTGACCACAATCCTAGTGCATGTACTCTTTTTCATCTTGATATGCTACCCTGAATTGATCCTCCCCACCATGTTCCTCTACATGTTTCTCATTGGAATATGGAACTTCAGGTATAGACCAAGGCACCCTCCTCACATGGACACAAAGCTTTCTTGGGCAGAAGCAGCACACCCTGATGAACTTGATGAAGAGTTCGACACTTTTCCCACCTCAAAGGCTCAGGATGTGATCAGAATGAGGTATGATAGGCTCAGGAGTGTGGCGGGGAGAATACAAACTGTGGTTGGAGACATTGCAACTCAAGGTGAGAGGTTTCATGCATTGCTCAGTTGGAGAGACCCAAGAGCCACAAGCCTATTTGTGATTTTCTGCCTCGTTACTGCTGTGGCTTTGTATGTGACACCTTTCAAGGTTGTGGCTTCAGTTGGTGGCATTTTCTGGCTTAGGCACCCCAGGTTTAGAAGCAAGCTACCATCTGTGCCTAGTAATTTCTTCAAGAGGTTGCCATCTCGTGCTGATGGCATGCTTTAA 2388 0.4518 MSSSQAAAKPNQEDYKLKDTKPELGERWPHGGQRGGSGWIYSERATSTYDLVEQMFYLYVRVVKAKDLPPNPVTSNIDPYVEVKVGNYKGKTRHFEKKTNPEWKQVFAFSKEKIQSSVVEVFVRDKDMVARDEYIGKVEFDMHEVPTRVPPDSPLAPQWYRLENLRGETRSRGEIMLAVWMGTQADEAFPEAWHSDSASVKGEGVYNIRSKVYVNPKLWYLRVNVIEAQDVEPNDKSQPPQVFVKGQVGQQVLKTKLCPTKTPNPMWNEDLVFVAAEPFEEQLVLTVENKASPGKDEVVAKISLQLNKFEIRLDHRPVHSHWYNLERFGFGVLEGDKRNETKFSSRIHLRVCLEGAYHVLDESTMYISDTRPTARQLWKQPIGILEVGILSAQGLQSMKTNNGKGSTDAYCVAKYGQKWVRTRTITESFNPKWNEQYTWEVYDPCTVITFGVFDNSHLGGSQQGSGAKVDSRIGKVRIRLSTLEMDRIYTNSYPLLVLKPSGLKKMGELQLAIRFTCLSMAHIIYLYGHPLLPKMHYLHPFTVNQLDSLRYQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHIWSMRRSKANFFRIVSLFSGAISMSKWLGEVEKWKNPVTTILVHVLFFILICYPELILPTMFLYMFLIGIWNFRYRPRHPPHMDTKLSWAEAAHPDELDEEFDTFPTSKAQDVIRMRYDRLRSVAGRIQTVVGDIATQGERFHALLSWRDPRATSLFVIFCLVTAVALYVTPFKVVASVGGIFWLRHPRFRSKLPSVPSNFFKRLPSRADGML 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00769 795 ProSiteProfiles C2 domain profile. 366 493 IPR000008 -
Cca02g00769 795 MobiDBLite consensus disorder prediction 12 28 - -
Cca02g00769 795 Gene3D C2 domain 40 181 IPR035892 -
Cca02g00769 795 Gene3D C2 domain 206 353 IPR035892 -
Cca02g00769 795 ProSiteProfiles C2 domain profile. 39 160 IPR000008 -
Cca02g00769 795 CDD C2C_MCTP_PRT_plant 220 372 - -
Cca02g00769 795 MobiDBLite consensus disorder prediction 1 37 - -
Cca02g00769 795 Pfam Plant phosphoribosyltransferase C-terminal 640 795 IPR013583 -
Cca02g00769 795 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 57 197 IPR035892 -
Cca02g00769 795 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 219 374 IPR035892 -
Cca02g00769 795 CDD C2D_MCTP_PRT_plant 384 512 - -
Cca02g00769 795 Gene3D C2 domain 380 519 IPR035892 -
Cca02g00769 795 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 10 795 - -
Cca02g00769 795 CDD C2B_MCTP_PRT_plant 57 183 - -
Cca02g00769 795 SMART C2_3c 220 318 IPR000008 -
Cca02g00769 795 SMART C2_3c 384 492 IPR000008 -
Cca02g00769 795 SMART C2_3c 57 154 IPR000008 -
Cca02g00769 795 ProSiteProfiles C2 domain profile. 200 323 IPR000008 -
Cca02g00769 795 PANTHER FT-INTERACTING PROTEIN 1 10 795 - -
Cca02g00769 795 Pfam C2 domain 57 160 IPR000008 -
Cca02g00769 795 Pfam C2 domain 383 495 IPR000008 -
Cca02g00769 795 Pfam C2 domain 219 325 IPR000008 -
Cca02g00769 795 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 383 517 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00769 Cca-Chr2 20049528 20052239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00769 11 795 Lipid Metabolism Gene Families AT5G06850 82.697 0.0 1397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00769 - - gmx:100802205 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00769 02 20049528 20052239 Cca10g01618 10 27860411 27862807 ECH
Cca02g00769 02 20049528 20052239 Cca04g01936 04 37711639 37715635 ECH
Cca02g00769 02 20049528 20052239 Cca02g00769 02 20049528 20052239 ECH
Cca03g02011 03 40228949 40232765 Cca02g00769 02 20049528 20052239 PCT