Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00767 ATGGCCGAAACGCAAGACTACCTCCAACTTTTCCTCCTCTGCCTACTCTCCACCATCGCGGTGGGAACCATCATATCGAAAACGCTGCGAAAACGACGTCGTCCACCGGGGCCACAGTCCCTCCCAATCATAGGTCACCTGCACCTGATCTCCGCCCTGCCACACCAGTCCTTCCACGCGCTCGCCACGCGCTACGGCCCCCTCATGCAGCTCTTTCTGGGGTCGGTCCCGTGCGTCGTCGTTTCGTCCCCGGAAGTGGCGAAAGAGTTCCTGAAGACGCACGAGGCCCGGTTCTCGAACCGGTTCGTGAGCGCCGCGGTGCACCAGTTGTCGTACGGCTCCAAGGGGTTCCTCTTCGCGCCCTACGGAACCTTCTGGAGGTTCGCCAAGAGAATTTGCATGTCGCAGCTTCTCGGTGCTCGAACCCTCGGCCAGTTGCGCCACGTTAGGGAACAAGAGACTCTCAGGTTTTTGCGCGTGATGAAAGCAAAAGGGGAGGCAAGAGAGGCCGTTGACGTTGGAGGGGAACTATTGACTTTGACCAACAACGTTATAACGAGGATGGTTTTGGGTCGAACGTGTTGCGAGAGCGATGCTGACGTGGAGGGTGTGAGGAAGATGGTGGAGGACACTGCTGAGCTGGCAGGGTTGTTTAACGTGGCGGATTTTGTTTGGTTTTGCAAGGGTTTGGATTTGCATGGGATGAATAAGAGGGTTGGGGAAATTATGAATAGGTTTGATGGCATTATGGAGAGGGTGATAAGGGAGCACgaggaggaaaggaagagaaagaaggaagaaggagtagaaggtgagaagaTCGGGGATTTGCTTGATATTTTGTTAGACATTCATGAAGATGAGAGCAACGAGATGAAATTCACTAGAGACAATGTCAAGGCTTTCATCATGGACATATTTATGGCGGGAACCGACACATCAGCAATAACCATGGAGTGGGCAATATCCGAGTTAATCAACAACCCGCAGGTGATGGAGAAAGCAAGACAAGAGATCGATTCAGCAACAGAAAACAACAGTCGATTAATACAAGAATCAGATCTTGGCAACCTTCCATACCTGCGAGCCATAGTGAAAGAGACCCTAAGGATCCACCCCACATCACCATTCATAGGAAGAGAATCATCCGAAAACTCCAACGTTTGCGGGTACGACATTCCAGCAAAGACCGTGTTGTTCGTTAACCTGTGGTCCATGGGAAGGGACCCTAAGCAGTGGGAGAGTCCACTTGAGTTCAGGCCAGAGAGGTTTatgatggatgatgatgatgatgatgagtttgatgtgaGGGGACATAATATGCAACTAATGCCGTTTGGGACAGGGAGAAGAGTGTGCCCTGGTGCTTCACTTGCACTTCAGGTTGTGCCCACAAACCTTGCTGCTATGATTCAATGCTTTGAATGGAAGGTCAATGGGAGGGTTAGCATGGAAGAGAAACCAGGCATGACTATTCCTAAGGCTCATCCTTTGCTTTGTGTCCCCGTGCCTCGCTTCTCGCTCCCCTTCTAG 1533 0.4905 MAETQDYLQLFLLCLLSTIAVGTIISKTLRKRRRPPGPQSLPIIGHLHLISALPHQSFHALATRYGPLMQLFLGSVPCVVVSSPEVAKEFLKTHEARFSNRFVSAAVHQLSYGSKGFLFAPYGTFWRFAKRICMSQLLGARTLGQLRHVREQETLRFLRVMKAKGEAREAVDVGGELLTLTNNVITRMVLGRTCCESDADVEGVRKMVEDTAELAGLFNVADFVWFCKGLDLHGMNKRVGEIMNRFDGIMERVIREHEEERKRKKEEGVEGEKIGDLLDILLDIHEDESNEMKFTRDNVKAFIMDIFMAGTDTSAITMEWAISELINNPQVMEKARQEIDSATENNSRLIQESDLGNLPYLRAIVKETLRIHPTSPFIGRESSENSNVCGYDIPAKTVLFVNLWSMGRDPKQWESPLEFRPERFMMDDDDDDEFDVRGHNMQLMPFGTGRRVCPGASLALQVVPTNLAAMIQCFEWKVNGRVSMEEKPGMTIPKAHPLLCVPVPRFSLPF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00767 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Cca02g00767 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 507 - -
Cca02g00767 510 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 507 - -
Cca02g00767 510 SUPERFAMILY Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 Coils Coil 332 352 - -
Cca02g00767 510 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00767 510 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00767 Cca-Chr2 20006167 20010815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00767 1 505 Cytochrome P450 AT5G06900 48.228 1.35e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00767 K24188 - gmx:100805931 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00767 02 20006167 20010815 Cca02g00767 02 20006167 20010815 ECH