Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00765 atgggaaagaacaagtggcgtgagctgaagcaccgctacaatgttgctgagatcgaggtccctgagcctcgggaggaggaggtcgcccctctgaaaacaaacagaaaaagaaagagggccgagaaggaggtcgggggaaactctgcccctccagatgccaaggaggtgacctccaaggctgctgatgctgaggcggtggacctcaccgggagtccaccgcctgaaggggctccccaaatggcttccgcgcagactgctgagcaagtcgccccctctgccgaggcagggataactgtcgaggtgaaggcccaggttgctgagcaagtcgctcaggccgccgtgagcgagctggtggcggcggttgagaagcgcctctacgacgaggtcgtccttggtggcaaagaggaggaggtcgcctctttgagagtggagctggcgaagatagaggcggagagggcgatgtcagagaagaagctggaggaaaccgagcggtctatcttggttgagcataagcggggtttcctcaaggcagctcgccaagcgaggcttcttgcccaggggttcgacttctctgccatgcacgtggagaaagacctcgaggacaactctaAAACTCTCTCTCGCAACTGCAACCGTCACTGCACAGTGCAATCTGTTCAAGAAGGAAACAACACCAAGCTCGCTCACAAGTGTAAACCAAGATTCAGAATCAGTTTAACTCAAATCGATTCGATTTTGTGTTTGGGAACCGATAAAGAAATGGTTTCCATCTACGTGTACGTAAATCTTGCCGTCGTTGTTTTCTCGGCAACTTTGGTTTCTCGGTGTTTCGCATTCACGGATCCCGCTGACGTCACAGCTCTCCAGGATCTATACAGGGCCTTAAACAACCCACAAGTGCTGCATCGATGGGACGGTGATGATCCTTGTGAGGAATCTTGGAAAGGAGTAGCATGTTCTGGCTCATCAGTTATACACCTCAAAATTCAAGGTTTAAACCTTACCGGGTTTCTTGGAGGTTTGCTTTATAATCTGCAAAACTTAAAGCAACTTGATGTCAGTTCTAACAGCATAGAGGGTGAAATACCACAAGGTTTACCCCCCAATGCCACACACATAAACATGGCTTGCAACTATTTGAGCCAAAATATCCCCCATTCATTGCCAACCATGGAAAAGCTAAGGCATCTGAATTTAAGCCACAATTTCTTGTCTGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCCTACAATAATTTCACCGGTGATCTTCCAAGTTCATTTGGTTCCTTGACAAACTTGGGTAGATTGTTCCTGCAGAATAACAGATTCACCGGATCAGTCGCCTACTTGGCTGAGCTTCCACTTATTGATCTGAATATTCAAGACAATCTGTTCAGCGGGATTCTACCACAGCATTTTCAGTCCATACCAAACTTGTGGATTGGAGCGAATAAGTTCCATGCCATAGACAACACTCCTCCATGGGCATTTCCTTTGGACAACGTACCTATTGAGGAAAATACTAGTCGCCCACCCATAACTCAGGCAAATGCCATCGAGAACTATGATCATCCTAAAGAAAAGAAACAAAAGAAGAAACGTATAGGTCCCGGAGGAATAGCTTTTATGGTTGGTGTAGGAACGTTATTGGCGACAGGTTTGGCGCTCCTTATTGCGATCGGTTTGAATAAACTTCAGACCCAGAGACTGGAGAACCAAGAAGGCAACCACAGTTCATTGCCTTCTTATCCAATCAATGCAACTAAAGAGGTTTCTACTTCGGCAATAGATGAGAGCCTGCAAATCCCACCTTACAATGCTGCATCCCTTTTGGGTCCAAGGCGATTACAATCTTCCCAGAACCATAAAAGAACAGGGGAGACATCAAGAAAAAGTTTTTCCGGAAGAGACAGATTCACTGGAAGAACAAAAGTTTATACAGTAGCGGAGGTTCAGTTGGTCACAAACAGTTTCCATGAAGACAACCTTCTTGGAGAGGGGTCCCTTGGCCCTGTTTACAGAGCTGAATTTCCAGATAACAAGGTTTTAGCAGTGAAGAATATCAACATGGCGGGCATGTCTTTCAGTGAAGAGGAAAAGTTCTTAGATGTCGTTTGTACCGCTTCCCGACTGAAGCACCCTAACATTGTTTCACTAAAAGGCTACTGTTTGGAGCACGGACAACATCTTCTTGTCTACGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCATAGTGCAGCATACAAAGCTTTATCATGGGGCACCCGTATCCGTATTGCTCTAGGCGTTGGTCAGGCATTGGACTATTTGCACTCGACGTTCTCTCCTCCTGCCGCCCATGGCAACTTAAAGGCTGCCAATGTTTTACTGGACGAAAATCTTATGCCTCGTGTTACTGACTGTGGCTTGGCTATTTTGAGACCACTGACAAGCAATAAAGTCCAAATTCGGGCTTCTGAGATTGATATTAGAGATACAGGATACAGTTCACCAGATCATGGCCAACCAGGAATAGGAAGCACGAAGAGTGACGTCTTCGCCTTTGGAGTGTTACTTCTTGAACTATTAACAGGAAGAAAACCATTCGACGGTTTCAGGCAAAGGGAAGAGCAACATCTGGCAAAGTGGGCTTCATCAAATCTTCATGATAGCGACAGTTTGGAACAGATGGTGGATCCGGCAATCAAAAGGACATTTTCGTCGAAGGCTCTTTCTCGTTATGCAGATATCATCTCCCTCTGCATTCAGCCTGTAAAGGAATTTCGACCTCCAATGTCTGAAATTGTGGACTCTCTTGTATCATTTACTCAAAATCTGGTTTCAAAGAACGATGCAACAGATGGTGCTGAACTTGATCCACTTGAGAGGTCCTTTCGCACAACCACCTCCCGCTTTATTGGTTCACCCGCAACGAGCTATGTATCCGCCTGA 2964 0.3489 MGKNKWRELKHRYNVAEIEVPEPREEEVAPLKTNRKRKRAEKEVGGNSAPPDAKEVTSKAADAEAVDLTGSPPPEGAPQMASAQTAEQVAPSAEAGITVEVKAQVAEQVAQAAVSELVAAVEKRLYDEVVLGGKEEEVASLRVELAKIEAERAMSEKKLEETERSILVEHKRGFLKAARQARLLAQGFDFSAMHVEKDLEDNSKTLSRNCNRHCTVQSVQEGNNTKLAHKCKPRFRISLTQIDSILCLGTDKEMVSIYVYVNLAVVVFSATLVSRCFAFTDPADVTALQDLYRALNNPQVLHRWDGDDPCEESWKGVACSGSSVIHLKIQGLNLTGFLGGLLYNLQNLKQLDVSSNSIEGEIPQGLPPNATHINMACNYLSQNIPHSLPTMEKLRHLNLSHNFLSGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLTNLGRLFLQNNRFTGSVAYLAELPLIDLNIQDNLFSGILPQHFQSIPNLWIGANKFHAIDNTPPWAFPLDNVPIEENTSRPPITQANAIENYDHPKEKKQKKKRIGPGGIAFMVGVGTLLATGLALLIAIGLNKLQTQRLENQEGNHSSLPSYPINATKEVSTSAIDESLQIPPYNAASLLGPRRLQSSQNHKRTGETSRKSFSGRDRFTGRTKVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPDNKVLAVKNINMAGMSFSEEEKFLDVVCTASRLKHPNIVSLKGYCLEHGQHLLVYDYVRNLTLDDALHSAAYKALSWGTRIRIALGVGQALDYLHSTFSPPAAHGNLKAANVLLDENLMPRVTDCGLAILRPLTSNKVQIRASEIDIRDTGYSSPDHGQPGIGSTKSDVFAFGVLLLELLTGRKPFDGFRQREEQHLAKWASSNLHDSDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKEFRPPMSEIVDSLVSFTQNLVSKNDATDGAELDPLERSFRTTTSRFIGSPATSYVSA 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00765 987 Gene3D Transferase(Phosphotransferase) domain 1 746 962 - -
Cca02g00765 987 Gene3D Phosphorylase Kinase; domain 1 626 744 - -
Cca02g00765 987 MobiDBLite consensus disorder prediction 22 45 - -
Cca02g00765 987 MobiDBLite consensus disorder prediction 22 89 - -
Cca02g00765 987 SUPERFAMILY L domain-like 280 489 - -
Cca02g00765 987 Pfam Leucine rich repeat 411 452 IPR001611 GO:0005515
Cca02g00765 987 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 264 955 - -
Cca02g00765 987 MobiDBLite consensus disorder prediction 623 644 - -
Cca02g00765 987 MobiDBLite consensus disorder prediction 629 644 - -
Cca02g00765 987 PANTHER LEUCINE RICH REPEAT KINASE 2 264 955 - -
Cca02g00765 987 Pfam Protein tyrosine and serine/threonine kinase 670 943 IPR001245 GO:0004672|GO:0006468
Cca02g00765 987 Pfam Leucine rich repeat N-terminal domain 282 320 IPR013210 -
Cca02g00765 987 SMART LRR_typ_2 415 438 IPR003591 -
Cca02g00765 987 SMART LRR_typ_2 391 414 IPR003591 -
Cca02g00765 987 SMART LRR_typ_2 439 462 IPR003591 -
Cca02g00765 987 SMART LRR_typ_2 345 369 IPR003591 -
Cca02g00765 987 ProSiteProfiles Protein kinase domain profile. 667 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00765 987 SUPERFAMILY Protein kinase-like (PK-like) 643 943 IPR011009 -
Cca02g00765 987 Coils Coil 131 165 - -
Cca02g00765 987 Gene3D Ribonuclease Inhibitor 281 511 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00765 Cca-Chr2 19916398 19928482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00765 263 987 Strubbelig Receptor Gene Family AT5G06820 53.741 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Cca02g00765 PK_Tyr_Ser-Thr 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00765 - - gmx:100793182 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00765 02 19916398 19928482 Cca02g00765 02 19916398 19928482 ECH