Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00739 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGCGGCGGTATGCGCGCATGAGCAAGGATGACTTGGACGACGCCTCCACCGCCGGCGACGCCCTCGTGTGGCACAGGGACCTCGAAAAGCACTCCTGCGGCGAGTTCTCCTTCGCCGTCGTTCAGGCCAACGAAATCATCGAGGATCACAGCCAGGTCGAGAccggctccgacgccgtcttcgtcggcgtctacgacggccacggcggcgccgaagccTCCCGCTTCATCAACGACCACCTCTTCCTTAATCTCATGAGAGTTGCTCAAGAAAATGGTAATATTTCTGAAGATATTATCAGAAATGCTGTTTCTGCTACCGAGGATGGGTTTCTGACTCTTGTTCGAAGAAGTTATGGCATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTTATATGGAAAGGGACACTTTATATTGCGAATCTCGGAGACTCTCGCGCTGTAATTGGTTCTGTGGGTAGATCTAACAAGATCATTGCTGAACAGTTGACCAAAGAGCACAACGCTAGCAAAGAGGAGGTTAGGCGAGAACTCAGGTCTCTGCATCCAGAAGATTCACAAATTGTTGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATCGGAGATGCATATTTGAAGCGGCCAGAGTTCTCATTTGATCCGTCATTCCCACGGTTCCACCTGCCTGAACCTATCCGCCGGCCTGTGCTGACAGCAGAACCATCTGTATGTTCAAGAGTTTTAAGACCAAATGATAAGTTCATTATCTTTGCATCTGATGGACTCTGGGAACACATGACAAACCAGGAAGCTGCTGAGATTGTTCATAACAATCCACGAACTGGGATTGCAAGAAGACTTCTTAAGGCAGCATTAAACGAGGCGGCTAGGAAGAGGGAAATGAGATATAGAGACCTACAGAAGATTGGAAAAGGGATCAGGCGTTTCTTCCATGATGATATCACTGTGGTTGTCGTGTTCTTCGACCACGAGTTGCGCGGCAAGAAGGTTACAGTTCCTGAGTTGTCTGTGAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCGGGGATTGGAATGA 1155 0.4528 MFSWLARIVSACLRPVRRYARMSKDDLDDASTAGDALVWHRDLEKHSCGEFSFAVVQANEIIEDHSQVETGSDAVFVGVYDGHGGAEASRFINDHLFLNLMRVAQENGNISEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSVGRSNKIIAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSVCSRVLRPNDKFIIFASDGLWEHMTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYRDLQKIGKGIRRFFHDDITVVVVFFDHELRGKKVTVPELSVKGFIDTVGPSNFRNLRGLE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00739 384 SMART PP2C_4 44 347 IPR001932 -
Cca02g00739 384 PANTHER ALPHABET, ISOFORM E-RELATED 6 369 - -
Cca02g00739 384 Coils Coil 180 200 - -
Cca02g00739 384 SUPERFAMILY PP2C-like 56 350 IPR036457 -
Cca02g00739 384 Gene3D - 30 358 IPR036457 -
Cca02g00739 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Cca02g00739 384 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 369 - -
Cca02g00739 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Cca02g00739 384 CDD PP2Cc 51 349 IPR001932 -
Cca02g00739 384 Pfam Protein phosphatase 2C 62 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00739 Cca-Chr2 18174154 18178960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00739 1 377 PP2C-type Phosphatase Gene Family AT5G06750 70.361 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00739 K01102 - gmx:100778238 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00739 02 18174154 18178960 Cca02g00739 02 18174154 18178960 ECH