Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00735 ATGCACCTTCCTTGGTTAGTCAAATATCAATTAGCATCAACCATCTTTATTGTCATTTCCCTCACCAATGTTACCTCCTTATATTTCAATTTCCCTACCTTCCAACAACAAGATGCTGATCGTTTATTGCTGAACCCGTATTCAAAAATATACTTAGATGCCATCCAAGTGACCCCTGATATTCGTGGTCCAATAAATGATTATTCAGGACGTGCTTTCTACCGCAAGCCATACAAACTTTGGAACAAGAAGAAGAACCAAAGTGCGTCCTTCAACACCACTTTTGTGCTCAACATCACTCCCGAAACTACCCCTGGTGGAGAAGGCTTGGCCTTCATCTTGACTTCAGACACCACTCTCCCACAAAACAGTTCAGGAGAATGGCTTGGAATTGTGAATGCCACTTCCAATGGAACCTCACAAGCTGCGATTCTAGCGGTGGAGTTCGACACAAGAAAAAGTTCCATACAAGATGGCCCTGACAACCATGTTGGCATCAACATAAACAGCATCAACTCCTTCCAACAGGTTCCTTTAACCAACACTGGGATCAATATTTCATCAGGTTTGGATGTAACAATCAGAATTCAATACTTGAATGACACAATATCAGTTTTTGGTTCCATGATTAATGGAACTTCTATGAAGACCCTTTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAGATGTTTACCTTGGTTTCTCAGCCTCAACAAGTAATTACACGGAGCTGAACTGTGTAAAATCATGGGAATTCAGTGGTGTTGATATTGGAGATCATGATAAAAGTATGGTGTGGGTTTATGTGACTGTTCCAACAGTGATTGTTGTTGTCATCATAGGTGGGTTGGTGATTTTTTTCATGCGTTTGCGAAGAAGTTATTTGGAGAGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGTTAAGGGAAATAACAAAAGCAACAGGTGGATTCAGCCCTCAGAACAAGCTTGGAGAAGGTGGATTTGGAACCGTGTTTAGAGGCTTATTGGAAAACAAGGAGGTAGCTGTGAAGAGAGTTTCCAAAAACTCACGCCAAGGGAAGCAAGAGTTTGTGGCAGAAGTTACAACAATTGGAAGCCTTCACCACAGAAATTTGGTGAAACTCACTGGCTGGTGCTATGAGAAAAGAGAGCTTCTCCTTGTGTATGAGTTCATGCCTAATGGAAGTCTAGACAAGTACCTCTTTGGTGACAAAAATTATGGCCTTGAAGGGTGTTCTTCAACACTGGATTGGGAAACTAGGCACAGTGTGATTCATGGGGTGGCACAAGCACTTGACTATCTCCACAATGGGTGTGAGAAGAGGGTGCTTCATAGAGACATCAAAGCCAGCAACATAATGTTGGACTCAGACTACAATGCAAAGTTGGGGGACTTTGGATTGGCAAGAACCATTCAGAAGAGAAACGAGACACACCACTCCACAAAGGAGATTGCAGGCACACCAGGGTACATGGCACCAGAGACCTTCCTCACAGGTAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTGCTTGTGTTGGAGGTGGTGTGTGGAAAGAGGCCAGGGAATGTGCATGCACAAGATGACTACAAAAACAGCATTGTGTATTGGGTGTGGGAGATGCATGGGAAGGGGAAGATTGTTGGTGCTGTGGATGGAAGGTTGAAAAAGGAGGAGATTAAGGAGGAGGAAGTGGAGTGTGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAACCCACACCTTAGGCCTTCCATGAGAACTGTTCTTCAGGTTCTCAATGGGGAAGCACCCCCACCTGAGGTGCCTAAGGAAAGACCAGCTTTCATGTGGCCTGCTATGCCTCCTTCCTTCAAAGAAGCTGAAGATAGTTCCCTCATCCAGGGTACACTCACTCCATTCACTGAAATCACTGGCAGATAA 1986 0.4406 MHLPWLVKYQLASTIFIVISLTNVTSLYFNFPTFQQQDADRLLLNPYSKIYLDAIQVTPDIRGPINDYSGRAFYRKPYKLWNKKKNQSASFNTTFVLNITPETTPGGEGLAFILTSDTTLPQNSSGEWLGIVNATSNGTSQAAILAVEFDTRKSSIQDGPDNHVGININSINSFQQVPLTNTGINISSGLDVTIRIQYLNDTISVFGSMINGTSMKTLLVSPPLNLSSYLQEDVYLGFSASTSNYTELNCVKSWEFSGVDIGDHDKSMVWVYVTVPTVIVVVIIGGLVIFFMRLRRSYLERPEDAYPRIEDQIQYSSMAPKKFRLREITKATGGFSPQNKLGEGGFGTVFRGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYEKRELLLVYEFMPNGSLDKYLFGDKNYGLEGCSSTLDWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNVHAQDDYKNSIVYWVWEMHGKGKIVGAVDGRLKKEEIKEEEVECVLVLGLACCHPNPHLRPSMRTVLQVLNGEAPPPEVPKERPAFMWPAMPPSFKEAEDSSLIQGTLTPFTEITGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00735 661 Gene3D Transferase(Phosphotransferase) domain 1 410 619 - -
Cca02g00735 661 ProSiteProfiles Protein kinase domain profile. 335 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00735 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 257 IPR013320 -
Cca02g00735 661 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 649 - -
Cca02g00735 661 Gene3D Phosphorylase Kinase; domain 1 320 409 - -
Cca02g00735 661 SUPERFAMILY Protein kinase-like (PK-like) 316 614 IPR011009 -
Cca02g00735 661 CDD lectin_legume_LecRK_Arcelin_ConA 27 257 IPR001220 GO:0030246
Cca02g00735 661 ProSitePatterns Protein kinases ATP-binding region signature. 341 362 IPR017441 GO:0005524
Cca02g00735 661 Gene3D - 25 267 - -
Cca02g00735 661 CDD STKc_IRAK 341 616 - -
Cca02g00735 661 PANTHER - 5 649 - -
Cca02g00735 661 SMART serkin_6 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00735 661 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Cca02g00735 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Cca02g00735 661 Pfam Protein kinase domain 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00735 Cca-Chr2 18034488 18036955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00735 69 628 Receptor kinase-like Gene Family AT5G10530 39.515 3.53e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca02g00735 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00735 - - gmx:100785031 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00735 02 18034488 18036955 Cca02g00735 02 18034488 18036955 ECH