Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00734 ATGCACCTCCCTTGGTTAGTCAAATATCAATTAGCAGCAACCATCTTCGTTATTGTAGCACTTACCAATGTTACCTGCTTATATTTCAATTTCACTACCTTCAAACCAGAGGATGAAGCTCGTTTATTGCTGAACCAGAATTCAAAAATATACTTAGATGTCATTCAAGTGACCCCTGATATTCGTGGCCCCATCTCAAACTATTCTGGTAGGGTCTTCTATAGGGAACAGCTGAAGCTATGGGACCGTGAAAGAGGCATGAAATCCTCATTCAATTCAACATTTGTTTTCAGTGTTGTTCCTGTAACCTCTCCTGGTGGTGAGGGATTTGCTTTCATATTGACAGATGACGCCTCTCTTCAAATTAACAGTGGAGGGCAATGGCTTGGGATTGTCAACTCAACAAGCATTGGGGTCACTAACATAGTAGCAGTGGAGTTTGATACAAGGAAAAGCTACCCTGAAGATATTAATGACAACCATGTAGGGGTGGATGTAAAGAGCATCTATTCCATTAAGCAAGAACCTCTTGGACCACATGGAGATTTGAAATTGAGGACACCAGTGCTTACGGTGGAACGTGATCTCTCTGAACTGCTTCCAGAAGATATTTATGTGGGATTTTCAGCTTCCACAGGAGAATATACCCAGATCAACGCAATAAGATCGTGGAATTTCTCTAGCTGGGAGGAGTATATCGAGAAGAATCCCAAAAATCTAACATGGTTATGGATCTTGATTCCAATAATTGTGGTTGGAGGAGCATGTGGGCTTGCTGCTATAAGCTATTGGAAAAAAGTAAACAAAAAGAAACATGGGATGGAGGAAGATTTGCATGTAGAGCTTGAAATTAAAAGCTCATCTAATGCTCCACATAAATTTCAGCTAAAGGAGCTTCTAGCAGCCACAAGAAATTTCCACTCATCAAACAAGCTTGGGAAAGGAGGATTTGGCATGGTTTATAAAGGCACCATAAATGGTATAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCACGTCACGGTAAGCAAGATTTTATAGCAGAAATCACCACCATAGGGAATCTCAATCATAAAAATCTAGTGAAGTTAATAGGATGGTGCTATGAAAAGGGTGAGATCCTCCTTGTGTATGAGCTCATGCAAAATGGGAGCTTAGACAGATTCATTTTTTCCAAATCAGGAGGGGATTTAACTCTGAGTTGGGAAAGGAGGCTTAGTGTTATACGTGGGGTTTCTCGAGCACTAGATTATCTTCATAATGGATGTGATAAAAGAGTGCTACATAGAGACATAAAACCCAGCAATGTGATGTTGGATTCAAACTTCAATGCTCGAATTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAGTGAAAAATCTCACCACTCAACTAGAGAGATTGCTGGAACACCGGGGTATATGGCACCAGAAAGCTTACACACCCGAAGGGCTTCAGTTGAAACTGATGTCTATGCATTTGGCATTCTGATACTGGAAGTTGTGTGTGGAGGAAGAAAGGGTGAACACATACAGGATCTGAGATGCTGTAACAGCATTGTGGACTGGGTTTGGGAGCTTCATGGCAGAGAAAACATAACTGATGCCGTGGATTTGAGACTGAGTGGTGATTTTGATGAGGCTCAGGCCAAGTGTGTGCTTGAGTTGGGGTTAGCATGCAGCCATCCTAACCCATATGAGAGGCCATCAATGAGAACTGTGTTGCAGGTGCTAATTGGGGAAGCAGCTCCCCCATTTGTACCATTTGAGAAGCCTGCTTTCACATGGCCAGCCACTGCTCCTGTTTTCAATGAAGAGATGAATTACCATGTTACAGTATCCCAAAATGAACCAATAACAGAACTGACTAGCGGGAGATGA 1884 0.4204 MHLPWLVKYQLAATIFVIVALTNVTCLYFNFTTFKPEDEARLLLNQNSKIYLDVIQVTPDIRGPISNYSGRVFYREQLKLWDRERGMKSSFNSTFVFSVVPVTSPGGEGFAFILTDDASLQINSGGQWLGIVNSTSIGVTNIVAVEFDTRKSYPEDINDNHVGVDVKSIYSIKQEPLGPHGDLKLRTPVLTVERDLSELLPEDIYVGFSASTGEYTQINAIRSWNFSSWEEYIEKNPKNLTWLWILIPIIVVGGACGLAAISYWKKVNKKKHGMEEDLHVELEIKSSSNAPHKFQLKELLAATRNFHSSNKLGKGGFGMVYKGTINGIDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMQNGSLDRFIFSKSGGDLTLSWERRLSVIRGVSRALDYLHNGCDKRVLHRDIKPSNVMLDSNFNARIGDFGLARTIHLSEKSHHSTREIAGTPGYMAPESLHTRRASVETDVYAFGILILEVVCGGRKGEHIQDLRCCNSIVDWVWELHGRENITDAVDLRLSGDFDEAQAKCVLELGLACSHPNPYERPSMRTVLQVLIGEAAPPFVPFEKPAFTWPATAPVFNEEMNYHVTVSQNEPITELTSGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00734 627 Pfam Protein kinase domain 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00734 627 Gene3D - 183 240 - -
Cca02g00734 627 Gene3D - 25 182 - -
Cca02g00734 627 SUPERFAMILY Protein kinase-like (PK-like) 287 579 IPR011009 -
Cca02g00734 627 CDD STKc_IRAK 312 579 - -
Cca02g00734 627 SMART serkin_6 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00734 627 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 245 IPR013320 -
Cca02g00734 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Cca02g00734 627 ProSitePatterns Protein kinases ATP-binding region signature. 312 333 IPR017441 GO:0005524
Cca02g00734 627 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 14 612 - -
Cca02g00734 627 Gene3D Phosphorylase Kinase; domain 1 283 380 - -
Cca02g00734 627 Pfam Legume lectin domain 183 235 IPR001220 GO:0030246
Cca02g00734 627 Pfam Legume lectin domain 27 178 IPR001220 GO:0030246
Cca02g00734 627 ProSiteProfiles Protein kinase domain profile. 306 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00734 627 PANTHER - 14 612 - -
Cca02g00734 627 CDD lectin_legume_LecRK_Arcelin_ConA 27 228 IPR001220 GO:0030246
Cca02g00734 627 Gene3D Transferase(Phosphotransferase) domain 1 381 584 - -
Cca02g00734 627 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00734 Cca-Chr2 17958276 17960318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00734 5 597 Receptor kinase-like Gene Family AT5G55830 36.937 1.77e-118 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca02g00734 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00734 - - tcc:108661882 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00734 02 17958276 17960318 Cca02g00734 02 17958276 17960318 ECH