Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00733 ATGATCATTGACCAAGAGAATTTTCAAATTGGAATCATTTCCATCCTCCTAAATTTGACCATCTATCCAACTTTCTATTATGAAAACAGCACAGATTTCATCATGTCTACAAATTCAGCCATACATAAAGGTGTCATTCAAGTCCCAACAGAAGCATCAGGATCAGAGATCTCAAACTTCTCGGGTAGGATCTTCTATAGTGAACAGATGAGGCTATGGGACAGTCAAAGAGGAATGAAGGCCTCATTCAATTCAACTTTTGTTTTCAATATTCATCCTTTAACCACTCCTGGTGGTGAGGGTTTAGCTTTCATATTGACAGCCAACACCTCTCTCCCAAACAACAGTGCAGGCCAATGGCTTGGGATTGTCAACTCAACAAGCATAGGGGTCAGCAACATAGTAGCAGTGGAGTTTGATACAAGGAAAAGCTACCCTGAAGATATTGATGACAACCATGTTGGGGTGGATGTAAAGAGCATTTATTCCATCCAGCAACAACCTCTTGGGCCACATGGTGTTAACCTTTCTAGTGGAATTGATGTTGTTGCTACTATTTACTTTGATGCCAAAGATGGAAAAATTAGCATTTTTGTCTCTAGATCAGATTTGAAGTTGAGGACACCGGTGCTTAAGGTAGATCTTGATCTCTCTAAGTTGCTTCCAGAAGATGTTTATGTGGGGTTTTCAGCTTCTACAGGAGCATATACTCAGGTTAACACAATAGGATCATGGTATTTCTCAAGCTGGGAGTATATAGAGAAGAATCCCATAAATCTAATATGGTTATGGATCTTGATTCCAATAATTGTGGTTGGTGGAGCATGTGGGCTTGTTGGTTTGTGTCGGTGGAGAAAGAAACACAGAAATGAACAAGGGGTGGAGGAAGATCTGAACATAGAGCTTGAAATTAAAAGCTCATCAAATGCTCCACATAAGTTTCATCTGAAGGAGCTTCTACATGCCACAAGGAATTTCCACTCATCAAACAAGCTTGGAAAAGGGGGATTTGGGATGGTTTATAAAGGCACCTTACACGGTAAAGATGTTGCTGTAAAGAGGATTTCCAAGAATTCACGTCATGGTAAGCAAGACTTTATAGCAGAAATCACCACTATAGGGAATCTCAATCACAAAAATCTAGTGAAGTTAATAGGATGGTGCCATGAAAAGGGTGAGATCCTCCTCGTGTATGAGCTCATGCAAAATGGGAGCTTAGACAGATTCATTTTTTCAACTTCTGGAGGGGATTCAACTCTGAGTTGGGAACAGAGGCTTAGTGTTATATGTGGGGTTTCTAGAGCATCAGAATATATGCAACCAGATGCTTTAAATAGTGTAAGCTATGGCTGA 1353 0.4021 MIIDQENFQIGIISILLNLTIYPTFYYENSTDFIMSTNSAIHKGVIQVPTEASGSEISNFSGRIFYSEQMRLWDSQRGMKASFNSTFVFNIHPLTTPGGEGLAFILTANTSLPNNSAGQWLGIVNSTSIGVSNIVAVEFDTRKSYPEDIDDNHVGVDVKSIYSIQQQPLGPHGVNLSSGIDVVATIYFDAKDGKISIFVSRSDLKLRTPVLKVDLDLSKLLPEDVYVGFSASTGAYTQVNTIGSWYFSSWEYIEKNPINLIWLWILIPIIVVGGACGLVGLCRWRKKHRNEQGVEEDLNIELEIKSSSNAPHKFHLKELLHATRNFHSSNKLGKGGFGMVYKGTLHGKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCHEKGEILLVYELMQNGSLDRFIFSTSGGDSTLSWEQRLSVICGVSRASEYMQPDALNSVSYG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00733 450 ProSiteProfiles Protein kinase domain profile. 326 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00733 450 Pfam Protein tyrosine and serine/threonine kinase 328 440 IPR001245 GO:0004672|GO:0006468
Cca02g00733 450 SMART tyrkin_6 326 449 IPR020635 GO:0004713|GO:0006468
Cca02g00733 450 Gene3D - 21 258 - -
Cca02g00733 450 CDD lectin_legume_LecRK_Arcelin_ConA 21 249 IPR001220 GO:0030246
Cca02g00733 450 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 23 441 - -
Cca02g00733 450 PANTHER - 23 441 - -
Cca02g00733 450 Pfam Legume lectin domain 22 251 IPR001220 GO:0030246
Cca02g00733 450 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Cca02g00733 450 ProSitePatterns Protein kinases ATP-binding region signature. 332 353 IPR017441 GO:0005524
Cca02g00733 450 SUPERFAMILY Protein kinase-like (PK-like) 307 440 IPR011009 -
Cca02g00733 450 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 257 IPR013320 -
Cca02g00733 450 Gene3D Transferase(Phosphotransferase) domain 1 299 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00733 Cca-Chr2 17943618 17945839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00733 55 440 Receptor kinase-like Gene Family AT3G55550 34.679 2.81e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca02g00733 Lectin_legB 3e-61 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00733 - - ccaj:109791166 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00733 02 17943618 17945839 Cca02g00733 02 17943618 17945839 ECH