Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00686 ATGGCTTTCCCTCCCCACGTAGTAGAAGACTGCATGGGCCTCCTCAAACTCTTCAGCGACGGCACCGTTTTCCGCTCCCACATACACTTCCAAGAACAACCCTCACACACCCAACACAACAACCTCGTCCTCTTCAAAGACTTCCTCTACCACAAAAAATTCAACCTCCACCTCCGTCTCTACAAACCCAAATCCAACAACCATGATGATAACAACAACGACAATAAATTACCCGTGGTAATGTTCCTCCACGGTGGAGGCTTCTGCTTCGGCTCgcatgcatggccgcatgtccatgcatgctgcctctgtcttgctgcaagcctccatgctgcTGTGGTGGCGCCAGACTATCGCCTGGCGCCAGAGCACCGTCTACCCGCTGCGGTGGAAGACGGTGTAGAGGCGGTGCGGTGGCTGCAGCGGCAGGCGCACGAGAAGGGGGACGTGTGGGTGAGGGAGGGCGTTGACTTTGGGCGGGTGTTCGTGGTGGGGGACTCGTCTGGCGGGAACATTGCGCACCACTTGGCGGTTCAGTTGGGGGCCGGTTCGGGGGAGATGGACCCGGTTCGCGTACGAGGTTACGTGATGATGGGTCCGTTTTTCGGTGGGGTTGTTCGGACGAGGTCGGAGGTGGGCCCATCGGAACAAATGCTGAACCTTGAGATGCTCGACAGATTTTGGAGGCTTTCAATACCTATTGGAGAAACCAGAGATCACCCATTGGCGAACCCATTTGGACCTGGCAGTCCAAACCTTGGAGATGTGAAGCTTGACCCTATCTTAGTCATAGTTGGTGGCAATGAATTGCTGAAGGACAGAGCAGCAGAATATGCAACAAGGTTAAAAGAACTAGGGAAGAACATTGAATATGTTGAGTTTGAGGGCAAGGAACATGGTTTTCTGACTCATGATTTATACTCAGAAGTTGCGGAAGAGGTCGTGCAAATCATTAAAAGGTTCATGCTTGAGAATTCTAAATAG 984 0.4909 MAFPPHVVEDCMGLLKLFSDGTVFRSHIHFQEQPSHTQHNNLVLFKDFLYHKKFNLHLRLYKPKSNNHDDNNNDNKLPVVMFLHGGGFCFGSHAWPHVHACCLCLAASLHAAVVAPDYRLAPEHRLPAAVEDGVEAVRWLQRQAHEKGDVWVREGVDFGRVFVVGDSSGGNIAHHLAVQLGAGSGEMDPVRVRGYVMMGPFFGGVVRTRSEVGPSEQMLNLEMLDRFWRLSIPIGETRDHPLANPFGPGSPNLGDVKLDPILVIVGGNELLKDRAAEYATRLKELGKNIEYVEFEGKEHGFLTHDLYSEVAEEVVQIIKRFMLENSK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00686 327 Pfam alpha/beta hydrolase fold 80 302 IPR013094 GO:0016787
Cca02g00686 327 PANTHER ARYLACETAMIDE DEACETYLASE 4 323 - -
Cca02g00686 327 Coils Coil 268 288 - -
Cca02g00686 327 Gene3D alpha/beta hydrolase 15 326 IPR029058 -
Cca02g00686 327 PANTHER CARBOXYLESTERASE 15-RELATED 4 323 - -
Cca02g00686 327 SUPERFAMILY alpha/beta-Hydrolases 4 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00686 Cca-Chr2 16067333 16076571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00686 7 321 Carbohydrate Esterase AT5G16080 33.333 4.88e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00686 - - gmx:100805368 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00686 02 16067333 16076571 Cca02g00686 02 16067333 16076571 ECH
Cca03g02619 03 47555755 47558929 Cca02g00686 02 16067333 16076571 PCT