Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00683 ATGGGCAACAACTGCGTGGGACCGAACGTCGGCAACGGCTTCCTCCAATCCGTCACGGCGAACTTGTGGAAGACGCGCCCGCCGGAGTCGCACCTCCCGCCGCCAGCCTCCGCCGACGCGAAGGCACTACCTCCGTCGCAAACCACCGATTCGTCGAAAGATCCGGAGCCGAAGCCCAGCCCCAAGCCTTCGGATTCAGATCCTCCGATGTCGGTCCAGAACACGCCGCCGGAGCAGGTCAAAATCCCGCCGGACGCCGCGAAGCCGCTCCCGCTGGACCACGAGAAACCGTCTCCGCCGGTGACCAGTGAAAACAAACCGAAGAAACCGACTCACGTGAAGCGCTTGTCGAGCGTGGGGCTCCAGGTGGAGTCGGTGCTCGGTCGCAAGACCGAGAACATGAAGGAGTTTTTCAGCTTGGGGAGGAAGCTAGGTCAGGGGCAATTCGGGACCACGTTCCTGTGCGTTCAGAAGGGGACGAACAAGGACTTCGCGTGCAAATCCATCGCGAAGAGGAAATTGACGACGCAGGAGGACGTGGAGGATGTGAGGAGGGAGATTCAAATAATGCACCACCTCGCGGGGCACCCCAACGTGATTCAGATAGTGGGGGCTTTCGAGGACGCTGTGGCGGTGCATCTGGTTATGGAGCTTTGTGCTGGTGGGGAGCTCTTTGACAGGATCATTCAGAGGGGGCATTACACCGAGAGAAAGGCTGCGGAGCTTGCCAGGGTCATTGTTAGTGTTGTGCAAGCTTGTCATTCTCTTGGGGTCATGCATAGGGACTTGAAGCCAGAGAATTTTTTGTTCATCAACCATGAGGAGGAGTCGCCGCTTAAGACCATAGATTTTGGCCTCTCTGTTTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGAAGCCCTTACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTACATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTATGTCTGAACCTTGGCCTAGCATATCTGAAAGTGCAAAGGATCTTGTTCGAAGGATGCTTGTAAGGGACCCTAAGAAGCGGATGACAGCACATGAAGTTCTTTGCCACCCATGGGTTCAGGTTGGAGGTGTCGCTCCTGATAAACCTCTTGATTCTGCTGTCTTGACTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCTATTCGAGTAATTGCTGAAAGTCTGTCCGAGGAAGAAATTGCAGGACTGAAAGAAATGTTCATGATGATAGACTCAGATAATAGTGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATTACTTGGTTGATGGAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACAAGATCCAGAAGGAGGATCATCTATATGCAGCATTCACATACTTTGACAAAGATGGAAGTGGATACATTACACGAGATGAGCTCCAACACGCCTGTGAACAGTTCGGCTTGAAGGATTACCAACTAGATGAAATAATGCGTGAAATTGACCAGGATAATGATGGACGTATTGATTATAGTGAGTTTGCTGCAATGATGCAAGACACTAATTTTGGCAAAAAGGGGTTTCAACCACAATGA 1764 0.5 MGNNCVGPNVGNGFLQSVTANLWKTRPPESHLPPPASADAKALPPSQTTDSSKDPEPKPSPKPSDSDPPMSVQNTPPEQVKIPPDAAKPLPLDHEKPSPPVTSENKPKKPTHVKRLSSVGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAFEDAVAVHLVMELCAGGELFDRIIQRGHYTERKAAELARVIVSVVQACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFMSEPWPSISESAKDLVRRMLVRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFMMIDSDNSGQITLEELKNGLERVGSVLKDSEITWLMEAADVDNSGTIDYGEFIAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITRDELQHACEQFGLKDYQLDEIMREIDQDNDGRIDYSEFAAMMQDTNFGKKGFQPQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00683 587 SUPERFAMILY EF-hand 436 583 IPR011992 -
Cca02g00683 587 CDD STKc_CAMK 137 395 - -
Cca02g00683 587 ProSitePatterns EF-hand calcium-binding domain. 524 536 IPR018247 -
Cca02g00683 587 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Cca02g00683 587 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 79 579 - -
Cca02g00683 587 SUPERFAMILY Protein kinase-like (PK-like) 138 397 IPR011009 -
Cca02g00683 587 ProSiteProfiles EF-hand calcium-binding domain profile. 511 546 IPR002048 GO:0005509
Cca02g00683 587 ProSitePatterns EF-hand calcium-binding domain. 558 570 IPR018247 -
Cca02g00683 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Cca02g00683 587 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Cca02g00683 587 SMART efh_1 515 543 IPR002048 GO:0005509
Cca02g00683 587 SMART efh_1 479 507 IPR002048 GO:0005509
Cca02g00683 587 SMART efh_1 443 471 IPR002048 GO:0005509
Cca02g00683 587 SMART efh_1 549 577 IPR002048 GO:0005509
Cca02g00683 587 SMART serkin_6 138 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00683 587 Gene3D Phosphorylase Kinase; domain 1 140 223 - -
Cca02g00683 587 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Cca02g00683 587 Pfam EF-hand domain pair 514 575 IPR002048 GO:0005509
Cca02g00683 587 Pfam EF-hand domain pair 444 504 IPR002048 GO:0005509
Cca02g00683 587 Gene3D - 403 580 - -
Cca02g00683 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 79 579 - -
Cca02g00683 587 Pfam Protein kinase domain 139 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00683 587 ProSiteProfiles EF-hand calcium-binding domain profile. 475 510 IPR002048 GO:0005509
Cca02g00683 587 ProSiteProfiles EF-hand calcium-binding domain profile. 549 580 IPR002048 GO:0005509
Cca02g00683 587 ProSitePatterns Protein kinases ATP-binding region signature. 144 171 IPR017441 GO:0005524
Cca02g00683 587 ProSiteProfiles Protein kinase domain profile. 138 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00683 587 MobiDBLite consensus disorder prediction 21 116 - -
Cca02g00683 587 Gene3D Transferase(Phosphotransferase) domain 1 224 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00683 Cca-Chr2 15914779 15921346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00683 1 585 EF-hand Containing Proteins AT2G38910 73.254 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca02g00683 Pkinase 6.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00683 K13412 - gmx:100813232 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00683 02 15914779 15921346 Cca02g00683 02 15914779 15921346 ECH