Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00666 GATTTAGAGATAAATTAGTAGAAACCAAGACTGCAGAGATATCTAACTTTCTTGATATGCTGAGGAGTGCTTCTTCAGATGATAGTGGAAGATCTAATACATCACACACTGATTGGAAATTAAAACAAGATGGTGAAGAGTTTCGAGTTATGTATCGCGAAGGGCCAGAGGGAACTCCCTTTCATACAATGCTTGTAGAAGGCTTTGTAGATGGGCCTGTTGATGTTTGTTTATGTATCTCATGGGAGACATCCCTTTACAGAAAATGGTGGCCTCAGTCTACTATTCCCACTTTCAAAATCTTATCAACTGAATGTTTGCAGAAGGTCCGTATTGGGGAACAATTATCACTAGTGAGGGTGAAGGTTTCATGGCCTTTGTCTCTGAGGGAAGCTATAGTGCACTATTATCTGTTTGAGTACTTTCAAGATGACTTAATTGTTGTTCTTACAAATTCGGTTCCTGAGTCAAAGAATGTCACAGAGATCCTTGGTTTCGACAGCGAGGCAATTCCTGAAGCAAAGGATGTCGTGAGAGTGGATTTGGTGGGAGGCTTTGCTTTGCAAAAGGTGACATCAGAAAGAAGTTACTTTCGGACGATAGCAAATATGGATATAAAGCTGGATTTTGTGCCTCCATCCCTCATAAATTTTATTTCAAGACAGCTCATTGGCAATGGTTTCAGACTTTACCAGAAGACTGTGTCTTCTATGATGAGCAATGATAAAGGAGAATTCAGCAAGGCCTTGGGGGATCCATTATATGTAAGAATTCGTGAAGCTTTATATAACACTAGTGGATCAAAGGCTATGGATGGCGAAGAGCTTCACCAAATTGCAAGTGTTCTCCCTGCTGAAGATCTTGTTGAAAGTAAGCATGGTGAGGAAAAAGATGCATCCATAGAAGATATAAGCAGTCAGTATGCAAATAATGCCATGCCAATGGCAATGAATACAAAAGTACTAGATAGTAGCAAGACATTTGGTGAGATTGTAGAAGTAGATTGTGAAGAAATTGAAATTGTGCAAAGTGAGGAAGAAGAATACCAAGAAGTAAAAGACACTCCAAAAAAGAAAGTTGATGAAACGAGAGTACTAAGGGGCAAGAGGGGTGTATATATCAGATCAGATGTAGCACAGGCTCTGGAAACATTAGACAAAGCCATTTCAATGGTTCGTGAACGGCGACTTCATTCTAGGGATGAATCTTCCAGCGTTGCCAATGAAGAGCCCCCTTGTATGAAAAATGATGGTGGAGTTGATCCATATTCCTCAAAGCTCATTCAACCAAGTTCCAAAAATGAGGTTAGTGTTGGAGTACCAAATGGAGGTATTCCAGAGGGAAGTTTACAAGAGGCACCTGAGACTAACTCTGGCATCCAAAACTCAAGGTACATGGGAACAAATCCAAACTTAAAGGAAGTGAATTCTAACAAAGTAGTACCAACTTCATCAGAGCAGAATCTTTCAAGACATATCTTGGCAAGCCAGGTTGTTTCATATTCTTTGGAAAATGGATCAATTCTGGATCAAACCACAATCAACAACAAGAAACTAAACCCTGATTCGATCAAAGCCGTGTCTTCAGATCATGTAGACAAGTCAAGAAGGCAGAAAAAACTAACTCAAGGAACAGACACATCATCAGTAACATTAGAATGGGCCATGTCTAATTTATTAAACCATCCAGAAATATTGAAGAAGGCAAAAAATGAATTAGACACTCATATTAGACAAAATTGCTTAGTTGATGAACCTGACCTTTCGAAACTCTCCTACCTTCAGAGCATTGTTTATGAGACACTTCGTTTACATCCTGCTGCGCCAATAGATCCCAAGTTGTGGAGTGATCCAACACATTTTAAGCCCGAGAGGTTTGAGAAGGAAAGTGAAGCAAGCAAGTTACTTTCATTTGGATTAGGGAGGAGGGCTTGTCCTGGTGCAAACTTGGCCCAACGTACAGTCAGCTTAACTCTGGCCTTGTTAATTCAATGTTTTGAGTGGAAAAGAACTAGCAAGGAAGAAATTGATATGACCGAAGGAAAAGGGGTCACTATGCCAAAAAAGTTTCCCTTAGAAGCTATGTGCCAAGTGTGTCAATCACCAACAATTAATGGCTCGGAGTTGGAAGGCAAGTGTACCGTCTCGGCTGAAGGTCGATCCGACCTCTCGGCATTATGGTCAGCTTACCCCCTGTGCCTTATAGGCTCGGGGCCGGAAGGCAAGTGTATCGTCACGGCTGGAGGCCGAGACGACCTATAG 2261 0.4122 FRDKLVETKTAEISNFLDMLRSASSDDSGRSNTSHTDWKLKQDGEEFRVMYREGPEGTPFHTMLVEGFVDGPVDVCLCISWETSLYRKWWPQSTIPTFKILSTECLQKVRIGEQLSLVRVKVSWPLSLREAIVHYYLFEYFQDDLIVVLTNSVPESKNVTEILGFDSEAIPEAKDVVRVDLVGGFALQKVTSERSYFRTIANMDIKLDFVPPSLINFISRQLIGNGFRLYQKTVSSMMSNDKGEFSKALGDPLYVRIREALYNTSGSKAMDGEELHQIASVLPAEDLVESKHGEEKDASIEDISSQYANNAMPMAMNTKVLDSSKTFGEIVEVDCEEIEIVQSEEEEYQEVKDTPKKKVDETRVLRGKRGVYIRSDVAQALETLDKAISMVRERRLHSRDESSSVANEEPPCMKNDGGVDPYSSKLIQPSSKNEVSVGVPNGGIPEGSLQEAPETNSGIQNSRYMGTNPNLKEVNSNKVVPTSSEQNLSRHILASQVVSYSLENGSILDQTTINNKKLNPDSIKAVSSDHVDKSRRQKKLTQGTDTSSVTLEWAMSNLLNHPEILKKAKNELDTHIRQNCLVDEPDLSKLSYLQSIVYETLRLHPAAPIDPKLWSDPTHFKPERFEKESEASKLLSFGLGRRACPGANLAQRTVSLTLALLIQCFEWKRTSKEEIDMTEGKGVTMPKKFPLEAMCQVCQSPTINGSELEGKCTVSAEGRSDLSALWSAYPLCLIGSGPEGKCIVTAGGRDDL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00666 752 PANTHER START-2 DOMAIN PROTEIN 326 539 - -
Cca02g00666 752 SUPERFAMILY Bet v1-like 33 233 - -
Cca02g00666 752 MobiDBLite consensus disorder prediction 395 419 - -
Cca02g00666 752 PANTHER START-2 DOMAIN PROTEIN 2 310 - -
Cca02g00666 752 Pfam Cytochrome P450 610 688 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 Pfam Cytochrome P450 540 608 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS E-class P450 group I signature 644 667 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS E-class P450 group I signature 634 644 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS E-class P450 group I signature 603 627 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS E-class P450 group I signature 551 577 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 MobiDBLite consensus disorder prediction 526 540 - -
Cca02g00666 752 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 637 646 IPR017972 GO:0005506|GO:0016705
Cca02g00666 752 MobiDBLite consensus disorder prediction 525 546 - -
Cca02g00666 752 Gene3D - 36 241 IPR023393 -
Cca02g00666 752 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 2 310 - -
Cca02g00666 752 Gene3D Cytochrome P450 502 701 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 326 539 - -
Cca02g00666 752 SUPERFAMILY Cytochrome P450 541 694 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS P450 superfamily signature 542 559 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS P450 superfamily signature 644 655 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g00666 752 PRINTS P450 superfamily signature 635 644 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00666 Cca-Chr2 15480074 15494404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00666 528 696 Cytochrome P450 AT4G37340 52.970 6.85e-61 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00666 - - gmx:100798284 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02602 03 47426293 47432001 Cca02g00666 02 15480074 15494404 PCT