Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00636 ATGCAGGCACTCAGCTCTCCTTACTTGGACAATGCATCAAATTCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTCTGTTTTTCCAGAGGACCCGGGTCAGCTGTTGAATGACAATAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAGAAGAAAAACCAAAGGACTTGAAGAGTAGAGGGTTGTGCTTGGTCCCAGTGTCTTGTACCCAACACGTTGGAAGCGAAAATGGGGCCGATTACTGGCCACCTGCATACGGCAGAGGATTTTAA 291 0.457 MQALSSPYLDNASNSKNMRNQQSVHGERNSVFPEDPGQLLNDNNGLKRKGAPNQDAEEKPKDLKSRGLCLVPVSCTQHVGSENGADYWPPAYGRGF 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00636 96 MobiDBLite consensus disorder prediction 1 65 - -
Cca02g00636 96 PANTHER BNAA01G07690D PROTEIN 14 86 - -
Cca02g00636 96 MobiDBLite consensus disorder prediction 1 28 - -
Cca02g00636 96 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 86 - -
Cca02g00636 96 MobiDBLite consensus disorder prediction 51 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00636 Cca-Chr2 14371067 14371871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00636 55 96 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.000 2.30e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00636 - - ccaj:109787693 205.297