Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00617 ATGCGAATTTACCGAAAGGCTTTCAAAGCTAATTACGCTTTCCCTCCCTGGATTTCCCCCCAGGCCAAATCCCTCATTTCCAACCTCCTCGTTGCCGACCCTGCTAAGAGCCCCATTGCGTTTTCCATCAAGGAGGATGTGCTCATCCACAACCTCGATTTCCACGACGACCACCACCACGAGGCTAAACCTCCCAGGCCCTTTTACAATGCGTTTGAGATTATTTCCTCGCTCTCCCACGGTTTTGATCTCAGGAGCTTGATCGAGACCAGGAAGCGCTCGCCCTCAGTCTTTATATGCAAGTTTTCTACTTCCGCCGTGCTGGGGAAGCTTGAGGCCGTCGCCAACAAGATTAACTTTAGGGTCACCGACAAGAAGGAGTTTGCGCTGACCATGCAGGGGGCGGAGGAGGGCCGCCTATCGCACCTGCTAATCGGAACTCCTACAACAAAAACGCCACAATAA 465 0.5247 MRIYRKAFKANYAFPPWISPQAKSLISNLLVADPAKSPIAFSIKEDVLIHNLDFHDDHHHEAKPPRPFYNAFEIISSLSHGFDLRSLIETRKRSPSVFICKFSTSAVLGKLEAVANKINFRVTDKKEFALTMQGAEEGRLSHLLIGTPTTKTPQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00617 154 ProSiteProfiles NAF domain profile. 64 89 IPR018451 GO:0007165
Cca02g00617 154 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 146 - -
Cca02g00617 154 PANTHER - 1 146 - -
Cca02g00617 154 Gene3D Kinase associated domain 1, KA1 65 152 - -
Cca02g00617 154 Pfam NAF domain 68 123 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00617 Cca-Chr2 13805187 13805708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00617 1 143 CBL-interacting serine-threonine protein kinases AT5G10930 37.500 1.16e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00617 - - gmx:100812424 197.208