Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00564 ATGACCACTTGTGTGTCAACAATTTTCGCACCTTCTAATACTAGAAACTCAGCAAGGGTGTTGACTGTTGGAGGAAGAAATCTGACTGGGAATTACCCTGGGAGAGCTTGTTTCATGAAAATGTATGACCGCAGGAGTGGATTTTCCAGTGGCAACCGAATGTTGGGTTTACTTCAAATTAAATGTTCATCCCAGAGTGTCAATCCATTCCATAGTCAAGGCCCTTTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGGGAGCAGTACAGTAAACAGCCCAAGAAAGGACAGCTTAGGTGGGGATTTATCTGAGAGCCTAGGAACTACATCTATTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATTGGTGTTGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGTTCGATGCATGGTGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCGCCTGTCTATCCTGAGAATCGTTTGCAAATTGGTCAGGAGCTTACACGAGGTCTTGGCGCTGGTGGTAACCCTGAAACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCGATAGAAGAGGCAGTCTATGGAGCTGATATGGTCTTTGTTACTGCCGGAATGGGTGGGGGTACTGGCACAGGTGGAGCTCCAATTATTGCTGGTGTAGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCTTTCTCATTTGAAGGAAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACGCTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATCCTTCGACAGGGTGTGCGAGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTGGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGAAAATCAAGAGCAAGAGATGCTGCATTGAATGCCATCCAGTCACCTTTACTGGATATTGGTATAGAGAGGGCTACTGGAATTGTTTGGAACATAACTGGTGGGACTGACATGACATTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCAACTGGATTCAAGCGTCAAGAGGAGAGTGAAGGGAGGCCCCTGCAGGCCAGTCAACTCACTCAAGCAGATACAACCTTTGGCGTCAATCGGCGACCTTCCTCTTTCACCGATGGTAGTTTGTTTGAGATACCTGAATTCCTGAGGAAGAAAGGAGGTTCTCGCTATCCAAGGACTTAA 1449 0.4403 MTTCVSTIFAPSNTRNSARVLTVGGRNLTGNYPGRACFMKMYDRRSGFSSGNRMLGLLQIKCSSQSVNPFHSQGPFLDLHPEVSMLRGEGSSTVNSPRKDSLGGDLSESLGTTSIQSDYNEAKIKVIGVGGGGSNAVNRMIESSMHGVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIAGVAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDMTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPLQASQLTQADTTFGVNRRPSSFTDGSLFEIPEFLRKKGGSRYPRT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00564 482 MobiDBLite consensus disorder prediction 88 109 - -
Cca02g00564 482 TIGRFAM ftsZ: cell division protein FtsZ 115 439 IPR000158 GO:0003924|GO:0005525
Cca02g00564 482 Gene3D Tubulin/FtsZ, GTPase domain 113 332 IPR036525 -
Cca02g00564 482 PRINTS Cell division protein FtsZ signature 210 230 IPR003008 GO:0005525
Cca02g00564 482 PRINTS Cell division protein FtsZ signature 238 259 IPR003008 GO:0005525
Cca02g00564 482 PRINTS Cell division protein FtsZ signature 301 323 IPR003008 GO:0005525
Cca02g00564 482 PRINTS Cell division protein FtsZ signature 324 345 IPR003008 GO:0005525
Cca02g00564 482 Pfam Tubulin/FtsZ family, GTPase domain 123 284 IPR003008 GO:0005525
Cca02g00564 482 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 480 - -
Cca02g00564 482 Gene3D - 333 442 IPR037103 -
Cca02g00564 482 ProSitePatterns FtsZ protein signature 2. 209 230 IPR020805 GO:0005525
Cca02g00564 482 SUPERFAMILY Tubulin C-terminal domain-like 316 430 IPR008280 -
Cca02g00564 482 SMART Tubulin_C_4 319 436 IPR018316 -
Cca02g00564 482 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 480 IPR045061 GO:0003924|GO:0005525
Cca02g00564 482 CDD FtsZ_type1 134 426 IPR000158 GO:0003924|GO:0005525
Cca02g00564 482 SMART Tubulin_4 123 317 IPR003008 GO:0005525
Cca02g00564 482 Hamap Cell division protein FtsZ [ftsZ]. 119 435 IPR000158 GO:0003924|GO:0005525
Cca02g00564 482 SUPERFAMILY Tubulin nucleotide-binding domain-like 122 320 IPR036525 -
Cca02g00564 482 Pfam FtsZ family, C-terminal domain 334 428 IPR024757 -
Cca02g00564 482 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00564 Cca-Chr2 12382658 12388602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00564 213 421 PP2C-type Phosphatase Gene Family AT1G75010 22.973 5.93e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00564 02 12382658 12388602 Cca02g00564 02 12382658 12388602 ECH