Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00535 ATGAGCATTGCAATGAAGATGTTACAGAATTTGCCACTACTACTTTTCTGTCTCTATTGTTTACCCATACAAGGATCAAATCAACATGAGAGAAAGCCTTACATTGTATACATGGGAGAGCTGCCAGTGGCTACAACCTATGCCCCAGAAGACCATCACAACAACATGCTGGCTACTGTGATTGGAGATCGGCAGCTAGCCAGAGAATACAAAATACACAGCTATGGAAAGAGCTTCAACGGATTCGTTGCACATCTTTTGCCACATGAAGCACAAAAATTACTAGAGGAGGACAATGTGGTATCAGTCTTTCCAAATACACATAACAAAATACACACTACAAGGTCATGGGATTATCTGGGATTGCCCCTAAGATTGAGCAGACACTCAGTTGAGAGCAATATCATTGTCGGTTTGTTAGATACAGGAATTTCGCTTGATTGCCCTAGTTTCAACGATAAGGGGTATGGGCCTCCCCCAAGCACATGGAAGGGCAAATGTGTGACAGGGCCCAATTTCACCGGATGCAACAACAAGGTGATCGGGGCAAAATTCTTCAACCTCCAAAACGCCCCGGTGACGAACCTGAGTCCGGCGGACGACGACGGGCACGGCACGCACACGGCCCTGGACGGCATcggcggcggcacggcgcggggcggggtggcgcgcgcCCGCATAGCGATGTACAAAGTGTGCTGGAGCATCATGGGCTGCAGCGACATGGACTTGCTGGCGGCGTTCGACGAGGCCATAGCGGACGGCGTCAACGTTATTTCGGTGTCTTTGGGAGGGTCTCCGAGGATGTTCTTCAGCGACCCCATGGCCATTGGATCCTTCCATGCCATGCAGAGAGGGATTCTCACTTCTTGCTCTGCTGGCAACGATGGACCTTCCACCATGACCGTTCAAAATGTCGCTCCTTGGATTTTGACTGTCGCCGCTTCCTCCACTGATAGGCGCTTCTCCACCGTCGTTGCTCTTGGGGATGGCGAGAAAGCTGCGGGAATGTCCATTAATACCTTTACCCCTGGGAAAAACATGTACCCACTGATTAGTGGAGAACTTGCTTCCAATGTTAGCCGAGACGGCTATGGCAATGCCAGTGCATGTGATTATGGAAGTCTAAGCAAGGAGAAGGTAATGGGCAAGATAGTGTACTGCCTTGGCACAGGGAACCAAGACTACGTGATCAAAGAATTGGACGGAGCAGGCACCATCATGGCTGTTGAAGACCCATCAGATTACTCAACCACCACTATTATTCCTGGGGTCTATGTTGATGCCTTCTCTGCTGGCAAAACCATTGACCATTACATCAATTCCACCAAGAATGCTCAAGCTGTTATACTGAAGACCATAAGTACAAGAAGCCCTGCTCCATACGTTGCTTCTTTCTCCTCCAGAGGTCCTCAATCCATCACCTTCAACATCCTAAAGCCTGACTTGAGTGCTCCGGGAGTGGACATTCTAGCTGGATTTTCCAAACTAGCAACACTAACAGGGGACCCTAAAGACAACCGTCGAAACGTTTTTAACATTTTGTCAGGAACATCTATGGCATGTCCACATGTTGCTGCTGCTGTCGCATATGTCAAATCCTTTCATCCTGATTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACTGCTACTCCCATGAGAATCAAAGATAAGACAGCAGAGCTAGGATCAGGGTCAGGACAGATCAACCCAGTGAGAGCATTGAATCCTGGCTTACTTTACAACATTAGCATGAACTCCTACATTGCATTCCTATGCAAAGAAGGCTACAACAGCAGCAGCATTGGAATAATAATTGGCACCAAAGGCTTCAATTGCTCCACCATTGACTCTCCACAAGGCACTGATGGAATCAACTACCCTTCCATGCATGTTCAAATCGTGCCTTCCAATTCCAGCATTTCTGCAGTCTTCTATCGGAGGGTGACCAACGTAGGATTTGGTAATTCAACTTACAAGGCCAGGGTCATAGCTCCTGAGGGTCTTTCCATTGAGGTTGTCCCAGACACGTTAAAGTTTAGTGGATTGCACCAAGAGTTGTCGTTCAAGGTTGTGCTGAAGGGGCCTCCAATGCCTGAGGAGACAAAGATATTGTCAGCATCACTCGAATGGAATGACTCCAAACACAGAGTGAGAAGCCCCATAGTTGTTTATAAACCGACCTTGTGA 2196 0.4686 MSIAMKMLQNLPLLLFCLYCLPIQGSNQHERKPYIVYMGELPVATTYAPEDHHNNMLATVIGDRQLAREYKIHSYGKSFNGFVAHLLPHEAQKLLEEDNVVSVFPNTHNKIHTTRSWDYLGLPLRLSRHSVESNIIVGLLDTGISLDCPSFNDKGYGPPPSTWKGKCVTGPNFTGCNNKVIGAKFFNLQNAPVTNLSPADDDGHGTHTALDGIGGGTARGGVARARIAMYKVCWSIMGCSDMDLLAAFDEAIADGVNVISVSLGGSPRMFFSDPMAIGSFHAMQRGILTSCSAGNDGPSTMTVQNVAPWILTVAASSTDRRFSTVVALGDGEKAAGMSINTFTPGKNMYPLISGELASNVSRDGYGNASACDYGSLSKEKVMGKIVYCLGTGNQDYVIKELDGAGTIMAVEDPSDYSTTTIIPGVYVDAFSAGKTIDHYINSTKNAQAVILKTISTRSPAPYVASFSSRGPQSITFNILKPDLSAPGVDILAGFSKLATLTGDPKDNRRNVFNILSGTSMACPHVAAAVAYVKSFHPDWSPAAIKSALMTTATPMRIKDKTAELGSGSGQINPVRALNPGLLYNISMNSYIAFLCKEGYNSSSIGIIIGTKGFNCSTIDSPQGTDGINYPSMHVQIVPSNSSISAVFYRRVTNVGFGNSTYKARVIAPEGLSIEVVPDTLKFSGLHQELSFKVVLKGPPMPEETKILSASLEWNDSKHRVRSPIVVYKPTL 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00535 731 Pfam Subtilase family 133 562 IPR000209 GO:0006508|GO:0008236
Cca02g00535 731 Pfam Peptidase inhibitor I9 34 111 IPR010259 -
Cca02g00535 731 PANTHER CUCUMISIN PROTEIN 23 728 - -
Cca02g00535 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 728 IPR045051 -
Cca02g00535 731 CDD Peptidases_S8_3 110 553 IPR034197 -
Cca02g00535 731 Gene3D - 319 456 - -
Cca02g00535 731 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Cca02g00535 731 PRINTS Subtilisin serine protease family (S8) signature 516 532 IPR015500 -
Cca02g00535 731 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Cca02g00535 731 SUPERFAMILY Subtilisin-like 111 581 IPR036852 GO:0004252|GO:0006508
Cca02g00535 731 Gene3D Peptidase S8/S53 domain 134 590 IPR036852 GO:0004252|GO:0006508
Cca02g00535 731 Pfam Fibronectin type-III domain 627 726 IPR041469 -
Cca02g00535 731 ProSiteProfiles Serine proteases, subtilase domain profile. 116 577 - -
Cca02g00535 731 Gene3D - 594 728 - -
Cca02g00535 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 112 IPR037045 -
Cca02g00535 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 517 527 IPR023828 -
Cca02g00535 731 CDD PA_subtilisin_like 325 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00535 Cca-Chr2 11468241 11475637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00535 11 551 Subtilisin-like Serine Gene Family AT5G03620 59.402 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00535 - - gmx:100816428 1219.14