Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00534 ATGAAGGTGATCGCCGCGTATTTGTTGGCCGTGCTCGGAGGCAACACCAGCCCCTCCGCCGCTGACATCAAGGAAATCCTTGGCTGTGTTGGAGCAGATGCCAATGATGATAGGATTGAACAATTGTTGTCTGAAATTAAGGGTAGAGATATAGTGGAGGTCATTGCTGCCGGTAGGGAAAAGCTGGCCTCAGTGCctgctggtggtggtggtgctgttgctcaacagcaccaccaccaccagcaGGCACTGAGGCCAGCTTTTCCCTACCGGCAGCAATGA 282 0.4362 MKVIAAYLLAVLGGNTSPSAADIKEILGCVGADANDDRIEQLLSEIKGRDIVEVIAAGREKLASVPAGGGGAVAQQHHHHQQALRPAFPYRQQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00534 93 Pfam 60s Acidic ribosomal protein 17 76 - -
Cca02g00534 93 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 74 - -
Cca02g00534 93 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 74 IPR044076 GO:0002182|GO:0003735|GO:0022625
Cca02g00534 93 MobiDBLite consensus disorder prediction 67 93 - -
Cca02g00534 93 CDD Ribosomal_P2 1 72 IPR044076 GO:0002182|GO:0003735|GO:0022625
Cca02g00534 93 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00534 Cca-Chr2 11428524 11429929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00534 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 70.000 1.12e-30 102