Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00529 ATGGGTTCGTTCGCTGGCACTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATACAGATAATGATGCAGGGATATATCAGTCCAATTCTGGATATAGCATGGCTGAGAAAAATCAGAAGCCTCCTGTGCTGAAACAGGGATTCAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTGCTCTTAAATCTTCATCAAGGAATTTGAGCTTTTTACAAGAAGGTACAAGCCCTAAGATGAAAAGTGCAATGAAAAAACCACTTATAGCAGGTGCTCCTCGGTCTCCACAAGTAGGACCTTACGAGCCTGTGACTTTGAAGCAGGCATTAAGAGACCTATGCATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCTAGAATATCTGAGGTTGGGAAGATACAGACATTGTATAATTCAGTTGTAGCTGAAGGTAGACGATCTGGTCCTTCTAATGTAGAGAGTAAAGGGAGTACAAGTGAAATATCTCAAGTGCCAGAAGAAAGCAACTCCCTTGCCTTGGATAAAACTTCCGAGTCTCATCAAGCTGTTAAAAGCACATCACTGAGTGAAAATGTTCAATCTTCCAAAATTGCTGTTGTAATTACACAAACTGGTACTGGGGCCTCATTGATGCAAAGTGACTTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTGTCACAGTCATCAGAGCCTGCTCAAATAGAAAAACAAACATCTGCATCTTCTCCATCTAGTTGTAATACCAATGGAAGTAAATTAGAGTTGCCTGAAAATGATTCATCCCCTAAAAAATTAGGAAATAAAGCATCTGTATCAAAGAATGGGCGGAAAGGTAGGTTACAGACAGTCTCTTCCTTGTCTAATCCAGTAAATGGCAATAGAGTGTGCAAAATGTCACGCAATGCCCCTCGTACAGTCAAATCGATTATCAAGAACAAGAATTTGGGTAAGAAAAAATCAAAGCAGGATTCAGTTTCTTCTTTATTTGATCCTACATCCAATGAAGTAAATAACAAGTCAGTTCCTGGTGCAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATAGAAAACAACAAAGGTATTGAAACATTGGACTCTATCAGTCCTGGAGACGGAATAAACTCTGTTACTGTGCATTCTGGCTCAGCATCAGCTGGCTGTAATAGCAGCACAGAAGTTACAAAAGTGAAAAAGAACACTGTATTGAAAGAGCAACTTGAACTTTCTCAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGATCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGCTAGATGGGAAGCTATACAGCATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGAAACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAACATTGTTTGTTTGCTATTAAGGTGATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCAAGGGCTCAAACCGAAAGAGAAATATTAAGGATGCTAGATCATCCTTTTCTTCCAACGCTGTACGCACAGTTTACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTcgctgaagtccttcttgctttggagtacttgcacatgcttggagtggtttaccgtgatttgaaacctgaaaacattcttgttcgagaagacggccacatTATGCTCACAGATTTTGATCTGTCATTGAGGTGTGATGTTAGCCCAACACTTCTGAAATCATCTTCAGATGCAGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCAAGTTGCATTGAACCATTCTGTATTGAACCATCATGTCAAGTTCCATGCTTCAGCCCCAGACTCCTACCTTCTGCAGCAAAAGCAAGGAAATTAAAAACTGATCTTGCTGCTCAGCTCAGATCATTGCCACAGCTCGTGGCTGAGCCCACAGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCACCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTACGAGCTTTTATATGGAAGAACACCCTTTAAAGGTTGTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACAGCCCATTTGTTAGTTTCCAAGCGAGGGACCTCATCAGAGGGTTGTTGGTTAAAGAACCTGAAAACCGTTTGGGTTCACAGAAAGGGGCTGCTGAGATAAAGCAACACCCTTTCTTCGAAGGCCTTAATTGGGCCCTAATACGTTGTGCTATCCCACCAGAACTTCCAGACTTCTGCGAATTTGGAATTTCAGAGATGACCCCACAGTCCCAGGGCAAGGGTGGTAAGTATGTAGAATGTAATGCAGCAGGAGAGCAAGTGGAATTTGAGTTGTTTTAA 2595 0.3961 MGSFAGTCEIVEAREDLNTDNDAGIYQSNSGYSMAEKNQKPPVLKQGFKDNLDDDINKLFESIALKSSSRNLSFLQEGTSPKMKSAMKKPLIAGAPRSPQVGPYEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAEGRRSGPSNVESKGSTSEISQVPEESNSLALDKTSESHQAVKSTSLSENVQSSKIAVVITQTGTGASLMQSDLASSSSKVGVLSQSSEPAQIEKQTSASSPSSCNTNGSKLELPENDSSPKKLGNKASVSKNGRKGRLQTVSSLSNPVNGNRVCKMSRNAPRTVKSIIKNKNLGKKKSKQDSVSSLFDPTSNEVNNKSVPGATQLVCERCWCAIENNKGIETLDSISPGDGINSVTVHSGSASAGCNSSTEVTKVKKNTVLKEQLELSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDARWEAIQHAQMQHGVLGLRNFNLLKKLGCGDIGTVYLAELIGKHCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDADPAKISGPCAQSSCIEPFCIEPSCQVPCFSPRLLPSAAKARKLKTDLAAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQGLRFPDSPFVSFQARDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCEFGISEMTPQSQGKGGKYVECNAAGEQVEFELF 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00529 864 MobiDBLite consensus disorder prediction 234 268 - -
Cca02g00529 864 MobiDBLite consensus disorder prediction 275 307 - -
Cca02g00529 864 MobiDBLite consensus disorder prediction 156 201 - -
Cca02g00529 864 Pfam Protein kinase domain 708 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00529 864 Pfam Protein kinase domain 480 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00529 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Cca02g00529 864 MobiDBLite consensus disorder prediction 234 349 - -
Cca02g00529 864 Gene3D Transferase(Phosphotransferase) domain 1 704 820 - -
Cca02g00529 864 Gene3D Phosphorylase Kinase; domain 1 477 558 - -
Cca02g00529 864 CDD STKc_phototropin_like 479 829 - -
Cca02g00529 864 ProSiteProfiles Protein kinase domain profile. 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00529 864 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 864 - -
Cca02g00529 864 MobiDBLite consensus disorder prediction 419 455 - -
Cca02g00529 864 SUPERFAMILY Protein kinase-like (PK-like) 456 828 IPR011009 -
Cca02g00529 864 Gene3D Transferase(Phosphotransferase) domain 1 559 627 - -
Cca02g00529 864 PANTHER FLIPPASE KINASE 1-RELATED 1 864 - -
Cca02g00529 864 MobiDBLite consensus disorder prediction 419 452 - -
Cca02g00529 864 SMART serkin_6 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00529 Cca-Chr2 11356588 11361326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00529 1 864 AGC Kinase Gene Family AT2G36350 51.357 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca02g00529 Pkinase 9.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00529 - K08286 gmx:100813470 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02498 03 46260916 46266353 Cca02g00529 02 11356588 11361326 PCT