Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00518 ATGAAGACGATAATAGAATCCTGTGTCTCTGCAAGTGCCACACGTGTGTGTGCCCCTCTGCCTCACACTAAGTATCCATGTAATAACAACATGTTTGCAACTTGTTCAGCATCATCCTCAATAACAAGAAGACCTTTATCTCTTTCTCTCATCTCCACCACTttctctgcattcatcttctcacttcctccacctccttcctcttcttccccctctccttcttcAAAATTTCCCCTATCAGATTTCTTTGAGATCCCCAATTCTGGTGGACTCAAGGCTTTGGACCTCCTTGAAGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGGAGGCTGGCAGCAAAACAAGGGTGGCGCTTTGACTCAACCTATGACCACAAAGATGACAATGGTGAACCCAATCCATTTGTCTTTGTCCTTGGTTCTAGCAAGGTTATTACTGGAATTGAGGTGGCAGTGAGATCGATGAAAGTTGGAGGTATTCGTCGAATCATCATACCCCCATCACTAGGGTATCAAAACACATCACAAGAGCCCATCCCACCTAATGTAAGAAACTTTTCCTGCTCCAAACTTGCCGTAAATTTTTTATATTCCACTTCATTTAAAAAATAA 633 0.387 MKTIIESCVSASATRVCAPLPHTKYPCNNNMFATCSASSSITRRPLSLSLISTTFSAFIFSLPPPPSSSSPSPSSKFPLSDFFEIPNSGGLKALDLLEGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSSKVITGIEVAVRSMKVGGIRRIIIPPSLGYQNTSQEPIPPNVRNFSCSKLAVNFLYSTSFKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00518 210 SUPERFAMILY FKBP-like 88 189 - -
Cca02g00518 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 23 190 IPR044197 -
Cca02g00518 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 103 189 IPR001179 GO:0003755
Cca02g00518 210 Gene3D - 80 194 IPR046357 GO:0003755
Cca02g00518 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 107 189 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00518 Cca-Chr2 11091153 11094140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00518 60 189 Calmodulin-binding Proteins AT3G25230 32.353 3.65e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00518 - - gmx:100808927 321.242