Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00507 ATGAAGGAGGTTCCTCACCATGCATTCTTCACGATGTTGTTTTTGTTTCTCTTACCATTCCTCACGTGGAGCCTCCACCACAACGACACTCACGCGCTCACCCTCTTCCGCCGCGGGAGCGACCTCCACGGCCACCTCCTCAGCAACTGGACCGGCGGCGACGCCTGCTCCGGCGCGTGGCGGGGCGTGCGGTGCTCCCCGAACGGGCGCGTGACGGCCCTCTCCCTCCCCTCCCTGAACCTCCGCGGCCCCCTCGACGCTCTCGCCGCCCTCACCCACCTCCGCCTCCTCGACCTCCACGACAACCGCCTCAACGCCACCGTCTCGCCCCTCCTCGCCAACTGCACGAACCTCCGCCTCCTCTACCTCGGCGCCAACGACCTCTCCGGCGAGATCCCGCCGCAGATCTCCTCCCTCGGGTCCCTCCTCCGCCTCGACCTCTCCGACAACAACATCCGCGGCAACGTGGATTCCCTCGCCAACTTAACGCACCTCATAACGCTGAGACTCCAAAACAACCTTCTCTCGGGACAAATCCCCGACCTCTCTTCCTCCATGAAAAGCCTCACGCAACTCAACATGACAAACAACGAGTTCTACGGTCGTTTACCAAACCCCATGCTAAAGAAATTCGGCTATGCAACCTTCTCCGGTAACGAGGGTTTATGCGGTGCTACACCCTTTCCTGTTTGTTCCTTCACCCCAAACCCTAGTGATAGTAataatgataatgataatgataatgaACCGGATGAAACGGTTCCCTCAAACCCTAGTTCTTTTCCGGAAACAAGCGTGATTGCTCGACCGGGGAAAGAGGGTCCACGTAAGGGGTTGGGTCCTGGTGCAATTGTGGCGATCGTGGTGGCGAACTGTGTGGCGCTGTTGGTGGTGACTTCTTTCGTGGTGGCGCATTGCTGTGCGAGGGGGAGAGGGTCGAGTTTGGTGGGGAGTGGGGAGAGTTATGGGAAGAGGAAGAGTGGGAGCAGCTACGGTGGTGGGAGTGAGAAGAAGGTTTACGCGAGTGGTGAGAGTGATGGGACTAGTGGGACTGATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATCTGCTGCGTGCGTCCGCAGAGATGCTTGGGAAGGGAAGCTTGGGGACGGTGTATAGGGCGGTGCTTGATGATGGCTGCACCGTCGCGGTCAAGAGGCTCAAGGACGCCAACCCTTGCGCCAGGCATGAGTTTGAACAGTATATGGATGTCATTGGGAAGCTTAAGCACCCCAATGTTGTCAGACTCAAAGCTTATTACTATGCCAAGGAGGAGAAGCTTCTTGTCTATGATTATCTCTCCAACGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGGAGAATTCCGTTGGATTGGACTACAAGAATAAGCTTGGTGTTGGGGGCAGCGAGAGGTCTTGGTAAGATTCATGGAGAGTACAGTGCAGCTAAAGTGCCTCATGGGAACGTGAAATCTTCCAACGTGCTTCTGGACAAGAACGGCGTTGCATGCATCTCTGACTTCGGCTTATCACTGTTGTTGAACCCGGTTCACGCCATTGCGCGATTGGGGGGGTACAGGGCCCCAGAACAGGAGCAACAGAAGAGGTTGTCGCAGCAGGCTGACGTGTACAGTTTCGGCGTGTTGCTGTTGGAGGTTCTCACGGGGAGGGCTCCTTCGTCGCAGTATCCTTCACCGGCTCGTCCAAGAATGGAGGAAGAGGAACAAGCGGTGGTGGACCTTCCCAAGTGGGTTCGCTCCGTTGTGAAGGAGGAGTGGACTGCGGAGGTGTTTGACCAAGAGCTTTTGCGGTATAAGAACATTGAGGAGGAGCTTGTGTCCATGCTCCATGTTGGGTTGGCTTGTGTGGTGCCGCAGCCTGAGAAGAGGCCAACCATGGATGAAGTTGTCAAGATGATTGAGGATATCAGGGTGGAGCAATCGCCTCTTGGGGAGGACTATGATGAATCCCGCAATTCGCTTTCGCCTTCCATTCCCACCACTGAAGATGGTCTAGCGTAG 2055 0.5567 MKEVPHHAFFTMLFLFLLPFLTWSLHHNDTHALTLFRRGSDLHGHLLSNWTGGDACSGAWRGVRCSPNGRVTALSLPSLNLRGPLDALAALTHLRLLDLHDNRLNATVSPLLANCTNLRLLYLGANDLSGEIPPQISSLGSLLRLDLSDNNIRGNVDSLANLTHLITLRLQNNLLSGQIPDLSSSMKSLTQLNMTNNEFYGRLPNPMLKKFGYATFSGNEGLCGATPFPVCSFTPNPSDSNNDNDNDNEPDETVPSNPSSFPETSVIARPGKEGPRKGLGPGAIVAIVVANCVALLVVTSFVVAHCCARGRGSSLVGSGESYGKRKSGSSYGGGSEKKVYASGESDGTSGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLGKIHGEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQQKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEEEQAVVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMDEVVKMIEDIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00507 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 675 - -
Cca02g00507 684 Pfam Protein kinase domain 376 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00507 684 MobiDBLite consensus disorder prediction 659 684 - -
Cca02g00507 684 Gene3D Phosphorylase Kinase; domain 1 345 447 - -
Cca02g00507 684 Gene3D Ribonuclease Inhibitor 26 229 IPR032675 -
Cca02g00507 684 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Cca02g00507 684 MobiDBLite consensus disorder prediction 314 350 - -
Cca02g00507 684 SUPERFAMILY Protein kinase-like (PK-like) 376 651 IPR011009 -
Cca02g00507 684 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cca02g00507 684 SUPERFAMILY L domain-like 27 207 - -
Cca02g00507 684 ProSiteProfiles Protein kinase domain profile. 372 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00507 684 Gene3D Transferase(Phosphotransferase) domain 1 448 672 - -
Cca02g00507 684 PANTHER LRR RECEPTOR-LIKE KINASE 13 675 - -
Cca02g00507 684 MobiDBLite consensus disorder prediction 234 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00507 Cca-Chr2 10789672 10792459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00507 24 680 Receptor kinase-like Gene Family AT2G36570 67.356 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca02g00507 Pkinase 6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00507 - - gmx:102660494 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00507 02 10789672 10792459 Cca02g00507 02 10789672 10792459 ECH
Cca03g02463 03 45720567 45722808 Cca02g00507 02 10789672 10792459 PCT