Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00506 ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTcctccgcgacgacaaccaccacctccaccagccctacgcgccgcaccaccacTTCTCCCCCGCCGCCGTCCCCGTCCCGCCCAAACCCGTCTCCGAGGACTACGCCAACCCCTTCGACGACGACGGCGCCAGCGAGAAGCGCAAGGACCGCGACGAGATCGGCGAGGGAGCCTCGTCCTACGGATTTAATAAGAGATCCAAgccgccgtccagcgccgctgccgccgccgccgAGTACCGGAAGGACCGGGAGGAGTGGAGCGACACGGCGATCGAGTGCCTGCTGGAGGCGTACACCGAGAAGTTCACGCAGCTGAATCGCGGAAACCTAAGGGGAAGGGATTGGGAGGAGGTAGCGGCGGTGGTGAGCGAACGGTGCGAGAACCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTATAAATTGGAGAGGCATAGAATGAGCAGTGGCTGCATTTCCACCAGTCTCTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGAAATTCTCTCTCGGCGAAGTTCTCCGACGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCTCCCAGGCAATCGAAGAGATATGGAGTGGCAACGCCCACCACTGGAGGTCAAGCTAATAGCATGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGAAGGGTAGTCCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTGGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCAACAGGTTTGGAAAGATGTACTGCGTACCAAGTAGGCATGATGGCAACCGTGATGAATTCAATATTGCTCCAATCGACTCTTGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTGGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACGTAGCTACAGCTCTCCGTGCTTCAGAGCTGAATGCTGAAGCAGTCCTCAAGGGTACTAACGTTGATGGTGTATATGACTGCAACTCACGAGATAACAATTTCACTTTTGAGCACATATCCTTTAGAGAGCTGGGATCAAGAGGCGTCACCTCTATGGATATGTCAGCACTGACATTCTGTGAGGAAAATTCTATTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCTTTGTGCGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1434 0.4742 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPAAVPVPPKPVSEDYANPFDDDGASEKRKDRDEIGEGASSYGFNKRSKPPSSAAAAAAEYRKDREEWSDTAIECLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSLWPWFKQLEQIVGNSLSAKFSDEDKAVVSAGTSPRQSKRYGVATPTTGGQANSMKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDVATALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDMSALTFCEENSIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00506 477 SUPERFAMILY Carbamate kinase-like 237 470 IPR036393 -
Cca02g00506 477 MobiDBLite consensus disorder prediction 210 229 - -
Cca02g00506 477 Pfam Myb/SANT-like DNA-binding domain 95 185 IPR044822 -
Cca02g00506 477 MobiDBLite consensus disorder prediction 51 67 - -
Cca02g00506 477 Coils Coil 138 165 - -
Cca02g00506 477 Gene3D - 233 471 IPR036393 -
Cca02g00506 477 Gene3D - 98 161 - -
Cca02g00506 477 CDD AAK_UMPK-PyrH-Ec 239 471 IPR015963 GO:0005737|GO:0006221|GO:0033862
Cca02g00506 477 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 50 477 IPR011817 GO:0006221|GO:0009041
Cca02g00506 477 Hamap Uridylate kinase [pyrH]. 236 471 IPR015963 GO:0005737|GO:0006221|GO:0033862
Cca02g00506 477 Pfam Amino acid kinase family 240 450 IPR001048 -
Cca02g00506 477 MobiDBLite consensus disorder prediction 19 88 - -
Cca02g00506 477 PANTHER URIDYLATE KINASE 50 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00506 Cca-Chr2 10784316 10789253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00506 98 189 Trihelix Transcription Factor Family AT3G14180 38.298 5.35e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Cca02g00506 AA_kinase 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00506 - - gmx:100805176 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00506 02 10784316 10789253 Cca02g00506 02 10784316 10789253 ECH