Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00496 ATGGAACTCTCTGTGTTCCACCATCAGCACCATCCTTTGATTCTTCATAGCCCCCTTACCTTGACAAGGACACACAAAAGACTTAACAACAAAAGTTCATATAGAATACCATGCCACTGTTCATGTTCTTCCACAAATAAAACTGCTGTAGAACCAGTTACACTGTCTTTAAGCATTGAAGGAAGAAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGCTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCCAAAATTCCTGAAAGTGATTATAAAACCTTGCCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGAATGGAGCCGAGGCTAAAAAGGGATCCCGTGTTGCAATCCACTATGTCGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGGGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAGGGCATGCGAGTAGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCGTATGGAAGCAAGGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGGTGAGTTATTGTTATCTCTTTCTTAACATTTGTTCCAGTAAGTTGATACTACAATTAATATTTTAG 696 0.4296 MELSVFHHQHHPLILHSPLTLTRTHKRLNNKSSYRIPCHCSCSSTNKTAVEPVTLSLSIEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYKTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIEVSYCYLFLNICSSKLILQLIF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00496 231 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 121 210 IPR001179 GO:0003755
Cca02g00496 231 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 9 212 - -
Cca02g00496 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 9 212 - -
Cca02g00496 231 SUPERFAMILY FKBP-like 96 209 - -
Cca02g00496 231 Gene3D - 85 213 IPR046357 GO:0003755
Cca02g00496 231 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 125 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00496 Cca-Chr2 10540093 10544302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00496 125 212 Calmodulin-binding Proteins AT5G48570 40.000 2.46e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00496 - - gmx:100305843 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00496 02 10540093 10544302 Cca02g00496 02 10540093 10544302 ECH