Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00475 ATGGAAGTTGAAATAATCTCTTCTCAGTGCATCAAACCCTCTGGCCCAATAATTGATCACCCAAAAACACATAAGCTTTCAATCTTAGACCAATTCATCCCTCCTATATATATTCCAATGGTACTTTTCTACTCTGCTGATCAAAACACTCAAACCATCACTGATATCACTCAGCAGAGAATGAAACAATTAAGGGAATCCTTAGCACAAGTCCTGACTCTCTTTTACCCATTTGCTGGAAGGGTTAAAGACAAGATTACCATCGATTGCAATGATAAAGGGGTTCACTACACCGAGGCTAAAGTAAGTTGTAGCCTAGCTGAATTTTTTAACCAATCTAATTTCTTGTCATTAATCTACAAGCTCCTTCCAAATCAAGCAACCATGGAAGTATCGGCAGAAGGGTACACAACTATGGCAAAAGTGACTTGTTTTGCATGTGGTGGCATAGTGATAGGTGCCTTAATATCTCACATGGTAGCAGATGGAGCAGGTGCGAGTTTCTTTTTAAACAGTTGGGGTTCTAACTCTTGTATCGGTAAGTTTCAACATACATTTGAATTTCCTAACTTTGACACCCCTTTCCCTCGAAATAATGCATCCCTACAAGACACAAATGCGATGCATTTGTGTGGCCAATTTTTGAACAAGGGTAGGCTTGGATCGAGGAGATTTTTGTTTGATGAAGAAGCTATTTCAAAGTTAAGAGCTCAGGGGTCAAGTTCAATTGTGCAAAACCCTACTCGAGTGGAGGTGGTAGCATCCCTTATATGCAAATGTGTTGCAAAAGCTTACAAGGCAAACACTGGTTTGGAGAGGCCAACTTTGATAACTCACGCAGTAAACTTGCGTCGAAGGGCGTCTCCTAATTTTCCAAACTCGTGTATGGGTAATTTTGTTTGGTTGCCTACAGCTTTAATGAGTCAAAATTATGAGTTACCTAAATTGGTTACTAAATTCAGGGAAGCAGTGACGTCAATTAGCTCTGATTTTGTGAAAAGCTTCCAAGGTGAAGCGGGGTATGTTAATTATTGTAAAAGTTCAAAACAGGTAATCGAAACAGCTTCAAGGGTTGCACAGATGAATTCAAGTGGGGTTAATTATCTTCATTATACGAGTTGGTGTAACTTTGGTCTCTATGATGTTGATTTTGGATGGGGAAAGCCAATTTGGGTGTCTTGTGTTGCTGATTCACTTGATAATAAGGATGATACATTGTTTTTCAACTCGGTGATTCTAATGGATACACCTTTAGGAAAAAGAATTGAAGTTTGGGTTTATTTAAAAGAAGATGAGATGGCCATATTGCAACAAGACAAAGAACTTCTTACGTTTGCCACCATGGATCCAAGTCCTCTGCAACTAAAGGATTAA 1374 0.3908 MEVEIISSQCIKPSGPIIDHPKTHKLSILDQFIPPIYIPMVLFYSADQNTQTITDITQQRMKQLRESLAQVLTLFYPFAGRVKDKITIDCNDKGVHYTEAKVSCSLAEFFNQSNFLSLIYKLLPNQATMEVSAEGYTTMAKVTCFACGGIVIGALISHMVADGAGASFFLNSWGSNSCIGKFQHTFEFPNFDTPFPRNNASLQDTNAMHLCGQFLNKGRLGSRRFLFDEEAISKLRAQGSSSIVQNPTRVEVVASLICKCVAKAYKANTGLERPTLITHAVNLRRRASPNFPNSCMGNFVWLPTALMSQNYELPKLVTKFREAVTSISSDFVKSFQGEAGYVNYCKSSKQVIETASRVAQMNSSGVNYLHYTSWCNFGLYDVDFGWGKPIWVSCVADSLDNKDDTLFFNSVILMDTPLGKRIEVWVYLKEDEMAILQQDKELLTFATMDPSPLQLKD 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00475 457 PANTHER F21J9.9 2 454 - -
Cca02g00475 457 PANTHER VINORINE SYNTHASE-LIKE 2 454 - -
Cca02g00475 457 Pfam Transferase family 1 442 - -
Cca02g00475 457 Gene3D - 219 446 IPR023213 -
Cca02g00475 457 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00475 Cca-Chr2 10163064 10164543 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00475 1 393 Monolignol Biosynthesis Gene Families AT5G48930 25.666 2.21e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00475 - - gmx:100792475 663.299