Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00470 ATGGAAGTTGAAATAATCTCCTCGCAGTTCATCAAACCCTCTTTCCCAACAACACACCCGAAATCCCATAAGCTTTCAATCTTAGACCAGTACATGCCTCCTGCATATATTCCAATGTTGCTTTTCTACTCTATTGATCAGAATACTCAAGCCATCGTTGATATCATCACACAAAAAAGAATGAAACAATTAAAAGAATCCTTATCACAAACCTTGAATCTCTTCTACCCATTCGCTGGAAGGATTAAAGATAAGGTTACCATCGATTGCAACGACGAAGGGGTTCACTTCACCGAGGCCAAGGTAAGTTGTAGCCTTGTTGAATTTTTCAACCAACCTAATTTATCATCATTAATCTACAAACTCCTTCCAAAGCAAGCAGTCATAGGAGTATCAGCTGAAGGGTACATAACTATGGCACAAGTGACTTGTTTTGCATGCGGTGGTATAGTGATAGGTACCTTAATATCTCACATGGTAGCAGATGGAGCAGGTGCAAGTTTCTTTTTAAACAGTTGGGGTTCTAACTCTCATATCAATGAGTTTCAACATGCATTTGAATTTCCTAACTTTGACACCCCTTTCCCTCGGAATAATGCATGCCCACAAGACAAGAATGCGATGCATTTGTGTTGTCAAACTCTAAAAGAGGGTAGGCTTACTACGAGGAGGTTTTTGTTTGATGAAGAAGCTATTTCAAGGTTAAGGGGTCAAGGGTCAAGTTCAACCGTGCAAAACCCTACTCGAGTGGAGGTGGTAGCATCCCTTCTGTGCAAATGTGCTGCAAAAGCTTCCAAGGCCAAATCTGGTTTAGAGAGGCCAACTCTAGTAATTCATTCAATAAACATGCGTCGAAGGGCATCTCCTAATTTTCCAAACTCGTGTATGGGAAACTTTGTTTGGTTGGCTATGGCTTTAATGAGTGCAAATGATGAGTTACCTGAATTGGTTACTAAATTACGGGAAACAGTGACATCTATCGACCATGACTTTGTTAAAAGATTCCAAGATGAAGGAGGGTTTGTTAATTTTTGTGAAAGTTTAAAACAGGTAATGGAAACAACTTCAAGAGTTGCAATGGGCACTGGGGTAAATTATCTTCGTTTTACGAGTTGGTGTAATTTTGGACTCTACGATGTTGATTTTGGATGGGGAAAGCCAATTTGGGTGTCTTGTTTTGCTGACTCAGTTGATGATTTGGTCATCCTAATGGATACACCTTCGAGAAAAGGTATTGAAGCTTGGATTTATTTAAACGAAGACAAGATGGCCTTATTGCAACAAGACAATGAACTCCTTATGTTTGCAACCATGGATCCAAATCCTCTGCGACTAAAGGATTATGTATCCCATGCCTGA 1359 0.3996 MEVEIISSQFIKPSFPTTHPKSHKLSILDQYMPPAYIPMLLFYSIDQNTQAIVDIITQKRMKQLKESLSQTLNLFYPFAGRIKDKVTIDCNDEGVHFTEAKVSCSLVEFFNQPNLSSLIYKLLPKQAVIGVSAEGYITMAQVTCFACGGIVIGTLISHMVADGAGASFFLNSWGSNSHINEFQHAFEFPNFDTPFPRNNACPQDKNAMHLCCQTLKEGRLTTRRFLFDEEAISRLRGQGSSSTVQNPTRVEVVASLLCKCAAKASKAKSGLERPTLVIHSINMRRRASPNFPNSCMGNFVWLAMALMSANDELPELVTKLRETVTSIDHDFVKRFQDEGGFVNFCESLKQVMETTSRVAMGTGVNYLRFTSWCNFGLYDVDFGWGKPIWVSCFADSVDDLVILMDTPSRKGIEAWIYLNEDKMALLQQDNELLMFATMDPNPLRLKDYVSHA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00470 452 Gene3D - 1 207 IPR023213 -
Cca02g00470 452 Pfam Transferase family 1 432 - -
Cca02g00470 452 PANTHER VINORINE SYNTHASE-LIKE 2 443 - -
Cca02g00470 452 Gene3D - 219 437 IPR023213 -
Cca02g00470 452 PANTHER F21J9.9 2 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00470 Cca-Chr2 10030746 10032221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00470 1 428 Monolignol Biosynthesis Gene Families AT5G48930 25.664 1.83e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00470 - - gmx:100792475 609.372