Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00469 ATGTTGCTTTTCTACTCTAATGATCATAATACTCAAGCCATCACTGATATGATCACACAACAAAGAATGAAACAATTAAAGGAATCCTTATCACAAGCCTTGAATCTCTTTTACCCATTCGCTGGAAGGGTTAAAGATAAGGTTACCGTCGATTGTAACGACGAAGGGGTTCACTTCACGGAGGCCAAAGTAAGTTGTAGCCTTGCTGAATTTTTCAACCAACCTAATTTATCATCATTAATCTATAAACTCCTTCCAAAGCAAGTAATCATGGAAGTATCAGCTGAAGGGTACACAACTATGGCAAAAGTGACTTGTTTTGCATGTGGTGGAATGGCGGTCGGTACCTTGATATCTCACATGGTAGCAGATGGAGCAGGTGCGAGTTTCTTTTTAAACAATTGGGGTTCTAACTCTCGTATCAGTGAGTTTCAACATGCATTTGAATTTCCTACCTTTGACACCCCTTTCCCCCATAATAATGCATGGCCACAAGACAAGAATGCGATGCATTTGTGTTGCCAATTTCTGAACAAGGATAGGCTTGCTACGAGGAGGTTTTTGTTTGATGAAAAAGCTATTTCGAGGTTAAGGGCTCAAGGGTCAAGTTCAACCGTGCAAAACCCTACTCGAGTGAAGGTGGTAGCATCCCTTCTATGCAAATATGCTGCAAAAGCTTCCAAGGCCAAATCTGGTTTAGAGAGGCCAACTTCGGTGATTCATACAATAAACATGCGTCGAAGGGCATCTCCTAATTTTCCAAACTCGTGTGGGAAACTTTGTTTGGCTGGCCACGGCTTTAATGAGGGCAAAcactactag 822 0.4136 MLLFYSNDHNTQAITDMITQQRMKQLKESLSQALNLFYPFAGRVKDKVTVDCNDEGVHFTEAKVSCSLAEFFNQPNLSSLIYKLLPKQVIMEVSAEGYTTMAKVTCFACGGMAVGTLISHMVADGAGASFFLNNWGSNSRISEFQHAFEFPTFDTPFPHNNAWPQDKNAMHLCCQFLNKDRLATRRFLFDEKAISRLRAQGSSSTVQNPTRVKVVASLLCKYAAKASKAKSGLERPTSVIHTINMRRRASPNFPNSCGKLCLAGHGFNEGKHY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00469 273 Gene3D - 1 169 IPR023213 -
Cca02g00469 273 Gene3D - 180 265 IPR023213 -
Cca02g00469 273 PANTHER F21J9.9 1 260 - -
Cca02g00469 273 PANTHER VINORINE SYNTHASE-LIKE 1 260 - -
Cca02g00469 273 Pfam Transferase family 19 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00469 Cca-Chr2 9998185 9999215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00469 26 140 Monolignol Biosynthesis Gene Families AT5G48930 33.884 2.52e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00469 - - ccaj:109811226 366.696