Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00453 ATGGTGGTGGCAACAAAAACCAAGGCCTTCATGCACCATCTTATCACTGGTCGCTGGTTCATGATTTTTGCCTCGTGTCTCATCATGGCGGTTTCAGGGGCAACATACATGTTTGGTTTGTACTCCAATGAAGTGAAAACCTCTTTGGGGTATGACCAGTCAACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCTGGTTTGATCAATGAGATAAGCCCTCCCTGGGTGATACTAGCCATAGGGGCCACTATGAACTTCGTTGGCTACTTCATGATATGGCTTTCTGTCACATCACGCATTGCAAAACCACAAGTGTGGCAAATGTGTCTCTACTTCTACATTGGTGCTAATTCTCAGTCTTTTGCTAACACTGGTGCTTTGGTTAACTGTGTCAAGAGTTTCCCTAGAAGCCGTGGAAGTGTTATTGGTCTCCTCAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGCTATACCATGCTTTCTATGGTGACAATTCTAAGGCTCTTATATTCCTCATTGGTTGGCTTCCTGCTGCTATTTCCTTCATTTTCCTTCCAACGGTTAGGGTCTTGAGTATCACCCCACAACACAAAGAGATCAAGAACAAGTTGAGTTTCACAAGAGTGGAGTACATAGTGGATGGCATGGTGGTTCTCTTTTTGCTTCTTCTACCACTTTTTGTTGTGTTTAGGGAAGAATTCAAACTCTGGAAGAACCAAAACCAAAACCAAACCTTCACTGATCAAGCAGATGTTGCTGCTTCAGTTATTGAATTGCCACAACCACAAGCAGCACCAACTGATTTGGAAAGGAAAAACAATTCATGTTTGAAGAACATTTTCAAGCCTCCACAAAGGGTGTTTGGTGTTGGAGGGACACTAACAGCACTTGACAATCTAGGACAAATTGGGAACTCATTGGGGTACCCCAAAAAGAGCCTCACAACTTTTGTGTCCCTTGTGAGTATATGGAACTACTTAGGAAGAGCATCTTCTGGCTTTGCCTCTGAGTACTTATTGACCAAATACAGGTTCCCTCGTCCCTTGATGCTCACTCTAGTCATGCTTCTTTCTTGTGTTGGCCATCTTCTAATAGCATTTGGTTATTTGTATGATAAAGAGGCTTTGAAGCAGTTGGAGATGAAGGGACTCATGAGGCAAAAGGGGAAGGACTTAACTTGCATGGGAGTGCAGTGCTATAAAATGGCTTTTATCATAATCACTGCTTCAACTTTAATTGGATGTTTTGTTTCCTTTATTCTAGTGTTGAGGACAAGGAAATTCTACAAAGGTGACATCTATGAGAAGTTCAGAGTTGAACTAGAGAATGCTGAGAGTGTTCCAACGTTTAGCAGCACTGGCACCACCACAAACCGCGCTGAAGAACCAGATAAAGCCAATAGAAAATGA 1440 0.4271 MVVATKTKAFMHHLITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAIGATMNFVGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDNSKALIFLIGWLPAAISFIFLPTVRVLSITPQHKEIKNKLSFTRVEYIVDGMVVLFLLLLPLFVVFREEFKLWKNQNQNQTFTDQADVAASVIELPQPQAAPTDLERKNNSCLKNIFKPPQRVFGVGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEYLLTKYRFPRPLMLTLVMLLSCVGHLLIAFGYLYDKEALKQLEMKGLMRQKGKDLTCMGVQCYKMAFIIITASTLIGCFVSFILVLRTRKFYKGDIYEKFRVELENAESVPTFSSTGTTTNRAEEPDKANRK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00453 479 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 210 378 - -
Cca02g00453 479 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 211 - -
Cca02g00453 479 PANTHER MFS TRANSPORTER 378 469 - -
Cca02g00453 479 PANTHER MFS TRANSPORTER 5 211 - -
Cca02g00453 479 Pfam Nodulin-like 18 223 IPR010658 -
Cca02g00453 479 MobiDBLite consensus disorder prediction 458 479 - -
Cca02g00453 479 SUPERFAMILY MFS general substrate transporter 18 430 IPR036259 -
Cca02g00453 479 PANTHER MFS TRANSPORTER 210 378 - -
Cca02g00453 479 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 378 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00453 Cca-Chr2 9623964 9625718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00453 8 474 Nodulin-like Gene Family AT2G39210 45.517 3.00e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00453 - - gmx:100814000 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00453 02 9623964 9625718 Cca02g00453 02 9623964 9625718 ECH
Cca03g02407 03 45161833 45164008 Cca02g00453 02 9623964 9625718 PCT