Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00430 ATGCTTAGGTCCTTTGTTGGGAAGATACAAAAGGGTGTTTCACTCTTTGCACACAGAAGGCCCCCAGTGAGGTACTTCAATGAGGCCACAGGTGAGGTGCCAGAAGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACCAAGGGTGGAGAATCCAAAAGGTTCATTGTTGGATTGCATTACTTGAATGATCCTGCTTTCCTGGGACTGTTGGATCAAGCTCAGGAAGAGTTTGGTTTCAGGCAAAAGGGTGCTCTTTCGATCCCTTGTCAGCCTCAAGAATTACAGAAGATTCTAGATGGTCGCAGAATGTAG 315 0.4571 MLRSFVGKIQKGVSLFAHRRPPVRYFNEATGEVPEDVREGYFAVLATKGGESKRFIVGLHYLNDPAFLGLLDQAQEEFGFRQKGALSIPCQPQELQKILDGRRM 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00430 104 Pfam Auxin responsive protein 31 99 IPR003676 GO:0009733
Cca02g00430 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 103 - -
Cca02g00430 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00430 Cca-Chr2 9109655 9110163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00430 30 99 Calmodulin-binding Proteins AT5G20810 44.286 2.75e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00430 - K14488 gmx:100791766 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00430 02 9109655 9110163 Cca02g00430 02 9109655 9110163 ECH