Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00429 ATGCTTAGGTCTTTTGTTGGGAAATTTCAAAAGGGTCTCTCTCAAATTGTGCCTACTAGAAAGCCTTCACTCAGCTACTTCAATGAAAACCAACTTGAAACCGCAAATGTTGTGCCAAATGATGTTAGGAAAGGATATTTTGCTGTTCTTGCAATCAAAGATGGAGAAACTAAAAGGTTTGTGGTTGAGTTAGATTACTTGACTAGTCCTGAATTTTTGGGACTATTGGACCAAGCTCAAGAAGAGTATGGCTTCAAACAGCAGGGAACTCTAGAAGTTCCTTGTAGGCCTCAAGAGTTACAGAAGATTCTAGATGGTTGGAGAACGAGATCAGACAGCATCAAAGGTGTAGGAAGGGATATTTATTTTCCTAAGTTCCTATGA 384 0.3932 MLRSFVGKFQKGLSQIVPTRKPSLSYFNENQLETANVVPNDVRKGYFAVLAIKDGETKRFVVELDYLTSPEFLGLLDQAQEEYGFKQQGTLEVPCRPQELQKILDGWRTRSDSIKGVGRDIYFPKFL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00429 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 123 IPR003676 GO:0009733
Cca02g00429 127 PANTHER SMALL AUXIN-UP RNA-RELATED 1 123 - -
Cca02g00429 127 Pfam Auxin responsive protein 36 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00429 Cca-Chr2 9078741 9079318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00429 39 104 Calmodulin-binding Proteins AT3G43120 39.394 6.03e-10 52.4