Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00428 ATGCTTAGGTCTTTTGTTGGGAAAATAGAAAAGGGTGTTTCACTCTTTGCACACAGAAGATCCTCATTGCGGTACTTGAATGAAGCCACAAGTGAGGTGCCAGATGATGTAAGGGAAGGATATTTTGCTGTTCTTGCAACCAAGGGTGGAGAATCCAAAAGGTTCATAGTCGGGTTGCATTACTTGAATGATCCTGCTTTCTTGGGATTGTTGGATCAAGCTCGGGAAGAGTTTGGTTTCAGGCAAAAGGGTGCACTTGCAATCCCTTGTCAGCCCCAAGAATTACAGAAGATTCTAGACGGTCGCAGAATGTAA 315 0.4413 MLRSFVGKIEKGVSLFAHRRSSLRYLNEATSEVPDDVREGYFAVLATKGGESKRFIVGLHYLNDPAFLGLLDQAREEFGFRQKGALAIPCQPQELQKILDGRRM 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00428 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 103 IPR003676 GO:0009733
Cca02g00428 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 103 - -
Cca02g00428 104 Pfam Auxin responsive protein 22 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00428 Cca-Chr2 9057956 9058880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00428 30 99 Calmodulin-binding Proteins AT3G43120 41.429 3.88e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00428 - K14488 gmx:100791766 179.489