Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00427 ATGATGTTTTCGTCTTTCTTTGGCAAGATATACAATAGTCTCTCAGTAATCTTTGCACCAACACTGATCAGCAACAAAGATCCACCGGATACAACAACAAATTTGCCTGATGATGTTTTGGAAGGACACTTTGTGGTTATTGCAAACAAGGGTGAAGAAACCAAAAGGTTTATTGTAGAGTTGCACTATTTGACTCACCCTGCATTTTTGGTACTGCTAGAGCGGGCAAAAGAAGAATATGGTTTCAGACAGAAGGGGGTTTTGCTAATTCCCTGCCACCCTCAAGAACTAGAGAAGATTCTAGAAGAACCAAGAGATGTGAGAGATGGAAGCAAATTAACAGATTCAAGTTAG 354 0.3983 MMFSSFFGKIYNSLSVIFAPTLISNKDPPDTTTNLPDDVLEGHFVVIANKGEETKRFIVELHYLTHPAFLVLLERAKEEYGFRQKGVLLIPCHPQELEKILEEPRDVRDGSKLTDSS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00427 117 Pfam Auxin responsive protein 33 102 IPR003676 GO:0009733
Cca02g00427 117 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 104 - -
Cca02g00427 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00427 Cca-Chr2 8999839 9000250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00427 36 92 Calmodulin-binding Proteins AT5G20810 50.877 7.68e-13 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00427 02 8999839 9000250 Cca02g00427 02 8999839 9000250 ECH