Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00408 ATGTTTAATTTTCAGAAAATTTATCTTCTATTGTCACTGTTGTTTGTTCCTGTTATGTGCAAGCATGATTGCACCGACAAGTGTGGACGCGTTCGCATTCAATTTCCATTTTACATCAGAAATAATAATTTGAGTCACACCGTCAGCTATCCCCCTGGGTTCGAGCTGTTTTGTAACGACAAACATGAGACTCTGCTGCAGCTCCCTGCTGTTCCTTCTAAACTATTTGTCAAAAGAATTGATTACAAGAAACAGCAAATCCATATCTACGACCCTCAAAACTGTCTTCCCAATGTGTTTTTAAAACTCGGCAATTCCTCTATTTATCCATTCCAATTCCCATCATTTTTGGATCAGCGGAGGCCTGATTATTTAAATGTTTCCTTCTTCGTTTGTAATTCAATGCCGTGCCCCATCATGCGCCCATCGGCCAATTCCTTGATTAATCCTGAAATGATGTCATGCACCAAGTTGGCAGATGCTTTGTCCGTCCAATGGTATTATTGGGATTGGGAAGTTGACCGAATAAACTTTATAATGAAATGGTCGAAATCCGAACACAACTGTAGTGACTGTGAAGCACAAGGCCAGAAATGTAAATGGAAGAATGGTACCAAAGCTGAAACCGAATGTTTCATTTGCCCAACCAACACCCTTCCAACATCAATTATGATATCTATTGCTGCAGGGGGAATATTTGGTTTTATTCTTTTGCTGCTACTGatgcttataggagatgAATATGACAAGTTAGTTGTACCCCCTGCTCCTTTTAACATCACCGGTTCTTCTACAACAAATTCCATTGTTCCAGCAAGACGTCAAAATTTTGAGTTGGAAGTTATTCATGAAATAGAAGAAGAGTAG 867 0.3875 MFNFQKIYLLLSLLFVPVMCKHDCTDKCGRVRIQFPFYIRNNNLSHTVSYPPGFELFCNDKHETLLQLPAVPSKLFVKRIDYKKQQIHIYDPQNCLPNVFLKLGNSSIYPFQFPSFLDQRRPDYLNVSFFVCNSMPCPIMRPSANSLINPEMMSCTKLADALSVQWYYWDWEVDRINFIMKWSKSEHNCSDCEAQGQKCKWKNGTKAETECFICPTNTLPTSIMISIAAGGIFGFILLLLLMLIGDEYDKLVVPPAPFNITGSSTTNSIVPARRQNFELEVIHEIEEE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00408 288 PANTHER RUST RESISTANCE KINASE LR10-RELATED 43 243 IPR045874 GO:0004672
Cca02g00408 288 PANTHER RUST RESISTANCE KINASE LR10-RELATED 242 286 IPR045874 GO:0004672
Cca02g00408 288 Pfam Wall-associated receptor kinase galacturonan-binding 24 91 IPR025287 GO:0030247
Cca02g00408 288 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 43 243 - -
Cca02g00408 288 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 242 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00408 Cca-Chr2 8590213 8592102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00408 25 232 C3H Transcription Factor Family AT2G46495 24.034 4.96e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00408 - - gmx:102669457 296.589