Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00392 ATGGGAGAAGTGAAGGTGATTGCTACACCTCAAAGCTTCCCTTGTGCAAGGATTGAATGGGCTTTAAGGATAAAGGGTGTGGAATATGAGTACTTAAAAGAAGACTTGGCAAATAAGAGTCCTTTGCTTCTTCAGTCTAACCCAGCCCACAAGAAAGTCCCAGTGCTCCTACACCATGACAACCCAATTGCTGAATCACTTGTGATCCTTGAATACATAGATGAGACATGGAAGGAGAACCCTTTGCTACCACTAGACCCTTATGAGAGGGCACAGGCTCGTTTCTGGGCCAAGTTTATTGATGACAAGTGTGTGTTTGGTGTATGGGGAGCCACTGTGGCCCAAGGAGAAGAGAAGGAGAAAGCCATAGATGCTGCACTAGAGTCACTTGCATTTATTGAGAAGGAAATTGAAGGGAAAAAGTATTTTGGTGGGGAGAAGATTGGTTATCTTGACATTGTAGTTGGGTGGATGTCTCATTGGCTCAATGTCCTAGAAGAGCTTGGAGAGATTGAACTACTCACTGCTGAGAGGTTCCCATCTCTTCATGCCtag 555 0.4468 MGEVKVIATPQSFPCARIEWALRIKGVEYEYLKEDLANKSPLLLQSNPAHKKVPVLLHHDNPIAESLVILEYIDETWKENPLLPLDPYERAQARFWAKFIDDKCVFGVWGATVAQGEEKEKAIDAALESLAFIEKEIEGKKYFGGEKIGYLDIVVGWMSHWLNVLEELGEIELLTAERFPSLHA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00392 184 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 183 IPR045073 -
Cca02g00392 184 CDD GST_N_Tau 4 77 - -
Cca02g00392 184 SUPERFAMILY GST C-terminal domain-like 75 184 IPR036282 -
Cca02g00392 184 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 184 IPR010987 -
Cca02g00392 184 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Cca02g00392 184 SFLD Main.3: Omega- and Tau-like 1 184 IPR045073 -
Cca02g00392 184 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Cca02g00392 184 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Cca02g00392 184 Pfam Glutathione S-transferase, C-terminal domain 96 184 IPR004046 -
Cca02g00392 184 PANTHER GLUTATHIONE S-TRANSFERASE 1 183 - -
Cca02g00392 184 CDD GST_C_Tau 87 184 IPR045074 GO:0004364|GO:0006749
Cca02g00392 184 Gene3D Glutaredoxin 1 82 - -
Cca02g00392 184 Gene3D - 83 184 - -
Cca02g00392 184 SFLD Main (cytGST) 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00392 Cca-Chr2 8265106 8267306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00392 3 183 Glutathione S-transferase Gene Family AT2G29420 47.514 1.22e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00392 K00799 - gmx:547587 322.398