Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00376 ATGACCAAAGCAAGGAAGCTTGGGGTTTGTACACCCGTGCTGTATGCTGTGGATGCTGTGTTGCACACTTTAACATTTGAGTATATTAACGGCCCTTCAGTCAAAGATGTATTTCTTGAATTCGGGTCAGGTGGCGCCAATGAAGAGAGTCTTGACAAAATTGCATCCCAAATTGGTGTTGCAATTGCAAAGCTACATGATGGTGGTCTTGTTCACGGTGATTTAACAACATCAAACATGTTACTCAAGAATGATACCAATCAGTTGGTTCTTATTGATTTTGGCTTGAGCTTCACTTCAACTCTACCGGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTATTCTGTCGATGCATTCTTCATGTGGAAATGTGATGAATCAAATACTAGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACAATGAACAAGCTGGCACAAGTGCGGCAAAGAGGACGGAAGAGGACCATGGTTGGATGA 492 0.4248 MTKARKLGVCTPVLYAVDAVLHTLTFEYINGPSVKDVFLEFGSGGANEESLDKIASQIGVAIAKLHDGGLVHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMNQILAAYRKSSKQWSSTMNKLAQVRQRGRKRTMVG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00376 163 Gene3D Transferase(Phosphotransferase) domain 1 46 160 - -
Cca02g00376 163 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 1 157 IPR022495 GO:0004674
Cca02g00376 163 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 163 IPR022495 GO:0004674
Cca02g00376 163 CDD PKc 24 97 - -
Cca02g00376 163 SUPERFAMILY Protein kinase-like (PK-like) 8 111 IPR011009 -
Cca02g00376 163 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 163 - -
Cca02g00376 163 Pfam Protein kinase domain 23 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00376 163 ProSitePatterns Tyrosine protein kinases specific active-site signature. 70 82 IPR008266 GO:0004672|GO:0006468
Cca02g00376 163 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00376 Cca-Chr2 7908923 7911661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00376 24 106 Core Cell Cycle Gene Families AT1G76540 32.941 2.35e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca02g00376 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00376 K08851 - gmx:100782376 283.108