Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00371 ATGGGAGAAGTGAAGGTGATTGCTACACCTCAAAGCTTCCCTTGTGCAAGGATTGAATGGGCTTTAAGGATAAAGGGTGTGGAATATGAGTACTTAAAAGAAGACTTGGCAAATAAGAGTCCTTTGCTTCTTCAGTCTAACCCAGCCCACAAGAAAGTCCCAGTGCTCCTACACCATGACAACCCAATTGCTGAATCACTTGTGATCCTTGAATACATAGATGAGACATGGAAGGAGAACCCTTTGCTACCACTAGACCCTTATGAGAGGGCACAGGCTCGTTTCTGGGCCAAGTTTATTGATGACAAGTGTGTGTTTGGTGTATGGGGAGCCACTGTGGCCCAAGGAGAAGAGAAGGAGAAAGCCATAGATGCTGCACTAGAGTCACTTGCATTTATTGAGAAGGAAATTGAAGGGAAAAAGTATTTTGGTGGGGAGAAGATTGGTTATCTTGACATTGTAGTTGGGTGGATGTCTCATTGGCTCAATGTCCTAGAAGAGCTTGGAGAGATTGAACTACTCACTGCTGAGAGGTTCCCATCTCTTCATGCATGGAGCCACAACTTCATTCAGACTCCACCTATCAAAGATTGCATTCCACCAAGGGAAACCGTGGTTGAATATTTCAGCTTTGGCATCAACTACGTGCGTTCCTTAGAAGCATCCACTAAATCTTGA 678 0.4454 MGEVKVIATPQSFPCARIEWALRIKGVEYEYLKEDLANKSPLLLQSNPAHKKVPVLLHHDNPIAESLVILEYIDETWKENPLLPLDPYERAQARFWAKFIDDKCVFGVWGATVAQGEEKEKAIDAALESLAFIEKEIEGKKYFGGEKIGYLDIVVGWMSHWLNVLEELGEIELLTAERFPSLHAWSHNFIQTPPIKDCIPPRETVVEYFSFGINYVRSLEASTKS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00371 225 CDD GST_N_Tau 4 77 - -
Cca02g00371 225 Gene3D Glutaredoxin 1 82 - -
Cca02g00371 225 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Cca02g00371 225 Gene3D - 83 217 - -
Cca02g00371 225 SFLD Glutathione Transferase (cytosolic) 2 210 IPR040079 -
Cca02g00371 225 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Cca02g00371 225 SFLD Main.3: Omega- and Tau-like 2 210 IPR045073 -
Cca02g00371 225 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Cca02g00371 225 PANTHER GLUTATHIONE S-TRANSFERASE 1 217 - -
Cca02g00371 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Cca02g00371 225 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Cca02g00371 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Cca02g00371 225 Pfam Glutathione S-transferase, C-terminal domain 96 193 IPR004046 -
Cca02g00371 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00371 Cca-Chr2 7842992 7845578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00371 3 209 Glutathione S-transferase Gene Family AT2G29420 45.894 7.61e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00371 K00799 - gmx:547587 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00371 02 7842992 7845578 Cca02g00371 02 7842992 7845578 ECH