Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g00370 | ATGAGGAATATCTCTAGAGTAGTGGTACTTTCATTATCAATAATAGTGTTGTTATCTAGCACAACACACTCAATTTATCTAAAGCCTGAAAGTCATATCAAGTCAGCTACTTTTGTGTCTGAAAATTTTGAAGTAGGACCAGGACAAATTGCGGTTAAAAATTTTTGGGATATTGAGTTTCCAAAAGGTCATGTTGGGGTAAAGAGTTTTGACGTTGAACTTATTGATGAAGATGGAAATTCTGTACCTTTGTATGAAACTTACTTTCATCATTGGTTTGCTATAAAATACTTTGAAAATATTACCTTGTCACGCAACATTGAACAATATCACGATCTTCGCAATGGAATCGTTTTCCAGAGAAATAGTGGTGCATGCCAAGGATACATGCTTCCACATTATTGGGGTTTAGGAGGTGAATCACGTGGAACATCCTCAAATCTTCCTGATCCTTTTGCAGTAGAATTAGGTAACCCTACAAAAATTCCAAATGGATTTAAAGAAAAATGGTTGTTCAACATCATGGCTATTGATACACGTGGTGCATATGATAGAAAAGGTTGCTCAGAATGCAGATGTAATCTTTTTAATTTACCAAATAACTTTTATAATGTCACAAATGGCATTGATGGGAAGCCATTATCCCTAAATTATAAAGGGGGACTACTTTGTTGTCAAGATAACTTACAATGCAAATTAAGAAAGGGTTTTGATGGCCCAAGGAGAAAGCTCTCCTTAAGATACAAAATAAGGTGGGTCGACTGGGATGAACACCAAGTGCCACTTAAGTTTTATATACTTGATGCAACTGATCGAGTGAAATCAAATGGTTCTACCACAATTCATGATTGCAAGGTGGAATATACTATTCCAAGAATACATGACAGTGACTCCCCAAATGTCCAAAAAGCAAGCATTCCAATGGAAAATGGTGGCTATCTTATCTATGCCACTACTCATATGCATACTGGTGTTGTCAACGCAACTCTATATGGACAGGATGGAAGAGTTTTATGTACTTCAACACCAAAATATGGAATGGGAAAGGAAGCCGGAAATGAAAAAGAACCTAAACGACAGCGTTGCAGAGTTTGGTTTTTAAACCCTATTCCTGAATCATCATCTCTCTGGAAGCCGCAATCGCCACTGGCCCCGCCGCAGCGGAAGAAGTTAGCATCATCAGAATCAGAGCGTGGAAGGGAGCGGCAGCTTTACGACGACGACCTCATTCTGAAGGCGAAGATCGACCTCTTGAACAACACCAACATGGTCGACTACGCCATGGACATCCACAAGAGCCTCTACCACACCGAGGACGTCCCCGCCGACATGGTCGAGCGCCGTGCCGAGGTTGTCGCCCGCCTCAAGTCCCTCGAGGAGGGCGCCGCCCCCCTCGTCGCCTTCCTCCAGAACGCCGCCGCCGTGCAGGAGCTCCGCGCCGACAAGCAGTACAATCTCCAGATGCTCAATGACCGATACCAGATTGGTCCTGCACAAATAGAAgcgttgtaccaatatgccaaatttcagtttgagtgtggtaactactctggggctgctgactatctatatcagtacagagctttgtgcactaatagtgaaaggagtttgagtgcattgtgggggaagctggcagctgaaattttgatgcagaactgggacattgctcttgaagagcttaatcgtttgaaggaaatcattgactcaaagAGTTTTTCATCACCTTTGAATCAGGTGCAAAGCAGAATATGGCTGATGCATTGGAGTCTGTTCATCTTTTTTAATCATGACAATGGAAGAACACAAATAATTGATCTGTTTAATCAGGACAAGTATCTAAATGCAATCCAAACTAGTGCTCCTCATCTTTTAAGATACTTGGCTACAGCATTCATTGTCAACAAGAGGAGGAGGCCTCAATTTAAAGATTTTATTAAAGTTATTCAACAAGAGCAGCATTCATACAAGGATCCCATCACTGAGTTTTTGGCTTGTGTTTATGTCAACTATGATTTTGATGGGGCACAAAAGAAGATGAGGGAATGTGAAGAAgtaattctgaatgaccccttccttggtaaacgagttgaagaaagcaacttttctactgtaccattaagggatgagttccttgaaaatgctaggctatttatcttcgagacatactgtagaattcaccagcgcattGACATGGGAGTGCTTGCTGAGAAGTTAAATTTGAATTATGAGGAGGCTGAGAGATGGATTGTTAATCTCATCCGTAGCTCAAAGCTTGATGCCAAAATTGACTCTCAAACTGGAACAGTTATCATGGAACCTAATCATCCAAATGTGTATGAGCAACTGATTGACCATACAAAGGCCCTTAATGGGCGCACCTACAAGTTGGTCAGTCAACTTCTGGAACACGCACAAGCTCAAGTAGCACGATAA | 2433 | 0.3568 | MRNISRVVVLSLSIIVLLSSTTHSIYLKPESHIKSATFVSENFEVGPGQIAVKNFWDIEFPKGHVGVKSFDVELIDEDGNSVPLYETYFHHWFAIKYFENITLSRNIEQYHDLRNGIVFQRNSGACQGYMLPHYWGLGGESRGTSSNLPDPFAVELGNPTKIPNGFKEKWLFNIMAIDTRGAYDRKGCSECRCNLFNLPNNFYNVTNGIDGKPLSLNYKGGLLCCQDNLQCKLRKGFDGPRRKLSLRYKIRWVDWDEHQVPLKFYILDATDRVKSNGSTTIHDCKVEYTIPRIHDSDSPNVQKASIPMENGGYLIYATTHMHTGVVNATLYGQDGRVLCTSTPKYGMGKEAGNEKEPKRQRCRVWFLNPIPESSSLWKPQSPLAPPQRKKLASSESERGRERQLYDDDLILKAKIDLLNNTNMVDYAMDIHKSLYHTEDVPADMVERRAEVVARLKSLEEGAAPLVAFLQNAAAVQELRADKQYNLQMLNDRYQIGPAQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSQTGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHAQAQVAR | 810 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g00370 | 810 | SMART | eIF3_N_2 | 400 | 510 | IPR019010 | - | |
Cca02g00370 | 810 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 399 | 807 | - | - | |
Cca02g00370 | 810 | Hamap | Eukaryotic translation initiation factor 3 subunit E [EIF3E]. | 389 | 802 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cca02g00370 | 810 | SMART | PINT_4 | 705 | 789 | IPR000717 | - | |
Cca02g00370 | 810 | Pfam | Stress up-regulated Nod 19 | 32 | 355 | IPR011692 | - | |
Cca02g00370 | 810 | Gene3D | - | 605 | 806 | - | - | |
Cca02g00370 | 810 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 399 | 807 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cca02g00370 | 810 | Pfam | eIF3 subunit 6 N terminal domain | 401 | 510 | IPR019010 | - | |
Cca02g00370 | 810 | ProSiteProfiles | PCI domain profile. | 592 | 776 | IPR000717 | - | |
Cca02g00370 | 810 | MobiDBLite | consensus disorder prediction | 375 | 400 | - | - | |
Cca02g00370 | 810 | Pfam | PCI domain | 658 | 772 | IPR000717 | - | |
Cca02g00370 | 810 | SUPERFAMILY | "Winged helix" DNA-binding domain | 705 | 776 | IPR036390 | - | |
Cca02g00370 | 810 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 705 | 789 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g00370 | Cca-Chr2 | 7814518 | 7826207 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g00370 | 383 | 810 | Eukaryotic Initiation Factors Gene Family | AT3G57290 | 85.047 | 0.0 | 756 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g00370 | K03250 | - | gmx:100797748 | 796.578 |