Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00327 ATGGGAATCTGCCATGGCAAACCCATCGAGACCCAACAACAAGAAAGTTCTCATGAGTTCCCAAACGAGGTTGCACCTTCGACTACAAAGCCCACGAAGCCCGCTAAGTTCCCGTTCTACAGCCCAAGCCCGCTGCCGAGTTGGTTCAAAAACTCGCCATCGTCGAACTCGAACCCGGGCAGCGTGGGCTCGACGCCGCTGAGGATCTTCAAGCGGCCCTTTCCCCCTCCCTCTCCGGCCAAGCACATCCGGGCCCTGCTGGCCCGCCGCCACGGCTCCGTCAAGCCCAACGAGGCCTCCATCCCCGAAGGGCCCGAGTGCGAGCTTGGGCTCGACAAGACCTTCGGCTTCGCCAAACACTTCTCGGCCCACTACGAGCTCAACGAAGAAGTGGGCCGCGGCCATTTCGGTTACACCTGCTCCGCCAAGCCCAAGAAGGGGCCCTTCAAGGGCATCGATGTGGCCGTCAAAGTCATTCCAAAGCCCAAGATGACCACAGCAATTGCCATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGTGCTCTAACAGGACATAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGATAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGAGAATTGCTAGATAGGATACTTTCAAGGGGTGGAAAGTACTCAGAAGAGGATGCCAGAGTTGTTATGATTCAAATATTAAGCGTGGTAGCTTTTTGTCATCTGCAGGGTGTTGTTCATCGCGATCTCAAGCCAGAGAATTTTCTTTTCACTTCTAAGGATGAAAATTCCACGTTGAAGGCCATTGATTTTGGACTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGAAGTGCTTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGTCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCTGTATTGAAGGCAGATCCAAGTTTTGATGAGGCTCCTTGGCCTTCTTTATCTACCGATGCAAAAGATTTTGTAAAGAGGTTGTTGAATAAGGATTATCGTAAAAGATTGACTGCAGCTCAGGCACTTAGTCATCCGTGGTTGGTGAATCATCATGATGATATGAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGCTCGTCTTCTTTACGCAAATCCGCTTTAGGGGCTCTTGCAAAGACGTTAACAGTAACTCAGCTAGCTTATCTCAGAGATCAATTTACTCTGTTAGGGCCAAACAAAAGTGGGTTAATATCTATGCAGAACTTCAAGACGGCTATTTTGAGGAGCTCTACTGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTGAACATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCATCAACTTGAGGGAATGGAGAGCTGGGAGCAGCATGCAAGACGTGCCTATGAGCTTTTTGAAAAGGATGGAAATAGACCGATCATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCAGTACCTGTTCATGTAGTACTTCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGGCTTCTGCATGGGGTTTCTTCTCGTGCATTTCAGAAGGCTTGA 1740 0.4661 MGICHGKPIETQQQESSHEFPNEVAPSTTKPTKPAKFPFYSPSPLPSWFKNSPSSNSNPGSVGSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGPECELGLDKTFGFAKHFSAHYELNEEVGRGHFGYTCSAKPKKGPFKGIDVAVKVIPKPKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSTDAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDMRIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVTQLAYLRDQFTLLGPNKSGLISMQNFKTAILRSSTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRAFQKA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00327 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Cca02g00327 579 PANTHER CDPK-RELATED KINASE 1 25 574 - -
Cca02g00327 579 ProSitePatterns Protein kinases ATP-binding region signature. 131 157 IPR017441 GO:0005524
Cca02g00327 579 Gene3D Transferase(Phosphotransferase) domain 1 215 409 - -
Cca02g00327 579 SUPERFAMILY EF-hand 417 570 IPR011992 -
Cca02g00327 579 MobiDBLite consensus disorder prediction 9 29 - -
Cca02g00327 579 Gene3D - 410 570 - -
Cca02g00327 579 SUPERFAMILY Protein kinase-like (PK-like) 115 418 IPR011009 -
Cca02g00327 579 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 574 - -
Cca02g00327 579 SMART serkin_6 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00327 579 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00327 579 Gene3D Phosphorylase Kinase; domain 1 118 214 - -
Cca02g00327 579 MobiDBLite consensus disorder prediction 1 38 - -
Cca02g00327 579 CDD STKc_CAMK 124 386 - -
Cca02g00327 579 ProSiteProfiles Protein kinase domain profile. 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00327 Cca-Chr2 6633756 6642631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00327 24 577 EF-hand Containing Proteins AT3G50530 69.270 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca02g00327 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00327 - - gmx:100796678 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00327 02 6633756 6642631 Cca02g00327 02 6633756 6642631 ECH