Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00319 ATGGGAAAGTCCGGACAACAACAGCACCCTCTGCCCTCCGCCGAGGATCCGCGGCGGAATGCGGCGGCGGAGGCCGGACGCGCCTTTTCCGTCGGACTCCGATGCCTTATTGTCTTGCTTTTCTCGCTCGCGCTTTTCCTCTCCGCACTCTTCTGGCTACCTCCATTTGCTCCCGACGCAGATCCCAAGGATCTGCATTTGAATTCAAAGTACAAAGATCATGATATTGTTGCAAGCTTTTATGTGCAGAAGCCAGTTTCTTTGCTACAAGACAACATTTTGCAGCTTTCTGATGACATTTTGGAAGAGATAGGGGTTCCCTCTATCAAAGTGGTCATCTTGTCTCTAGATCTCTTACCACGGATAAACAAGACGAAAGTGGTGTTTGCAGTTGATCCTGAAGATAAAAATTCAGAAATGTCTACAGCTTCCATTAGTTTGATAAGAGCATCATTTAAATACTTGGTTATACGCCAATCATATCTCCAGCTCACTACATCCTTGTTTGGTGTACCCTCCTTTTTTGAGGTGCTGAAATTTAAGGGAGGGATCACTATCATTCCACAACAAAGTGTGTTTCCTCTGCAAGCAGTGCAAACATTATTCAACTTTACTTTGAATTTCTCCATTTATGAAATACAATTAAATTTTGAGCAGCTGACAAGTCAGCTTAAATCTGGACTGCATTTGGCACCTTATGAGAACGTGTATGTGATCTTATCAAACTCCGAAGGTTCTACAATAGCTGCTCCTACTATTGTTCAATCGTCTGTCCTACTTGCAGTTGGGATTGCACCATCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATCATGGGGCATCATCCTTCATGGAACCTTGGGTTGAATAACACTGAATTTGGTAGGGTTAAGCAGGTTCGACTTTCATCCATCTTGCAACACTCCCTTCATGGCAATGCTAGGTCACCTTCCCCTGCCCCTCTGCCTCATCCTcaccaccaccatcaccaccaccaccaccaccaccatcaccaTCGGCACCATAATCACCACCACAATGCCCATGTATTACCTGAAActtcaccttcaccttcacctccaccttcaccttcaccttcaccGGCACCTACACCTGGGGAAAGTGCTGCTTCACCTATGTTTGGTTCTACTGCTCCTGCAAGAAGTTCTTATGCTCAGCCTCCGAATTGTCAATTTGGTTATAGAAAGAGATCTCCCAGGAACACTGAAAAACATGTTCATCTAATAACACCTGCAGTTGCTCCTACTAATGCTCCACACTATCCTGTTGCTTCACCATGGAGGGCTGGACCACCAGAACATGTCTTTCATTCTTCAGTTCCTGCTTTGAGTCCTTTACCAAACGTAGCATTTGCACATGCTGAGCCCCCTCCTAAGAATGAACCATCTGTCCCACATTCTGACACATATTTTCATGGGCCATCACCATCTTCATCTTCTGCAGGTTGTGTTGGAACTGTTAAATGGACAACTTTAATGTTTTTAGTACTTGTATTACTTGTATAA 1527 0.4191 MGKSGQQQHPLPSAEDPRRNAAAEAGRAFSVGLRCLIVLLFSLALFLSALFWLPPFAPDADPKDLHLNSKYKDHDIVASFYVQKPVSLLQDNILQLSDDILEEIGVPSIKVVILSLDLLPRINKTKVVFAVDPEDKNSEMSTASISLIRASFKYLVIRQSYLQLTTSLFGVPSFFEVLKFKGGITIIPQQSVFPLQAVQTLFNFTLNFSIYEIQLNFEQLTSQLKSGLHLAPYENVYVILSNSEGSTIAAPTIVQSSVLLAVGIAPSKERLKQLAQTIMGHHPSWNLGLNNTEFGRVKQVRLSSILQHSLHGNARSPSPAPLPHPHHHHHHHHHHHHHHRHHNHHHNAHVLPETSPSPSPPPSPSPSPAPTPGESAASPMFGSTAPARSSYAQPPNCQFGYRKRSPRNTEKHVHLITPAVAPTNAPHYPVASPWRAGPPEHVFHSSVPALSPLPNVAFAHAEPPPKNEPSVPHSDTYFHGPSPSSSSAGCVGTVKWTTLMFLVLVLLV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00319 508 MobiDBLite consensus disorder prediction 322 347 - -
Cca02g00319 508 MobiDBLite consensus disorder prediction 354 373 - -
Cca02g00319 508 MobiDBLite consensus disorder prediction 311 408 - -
Cca02g00319 508 MobiDBLite consensus disorder prediction 382 396 - -
Cca02g00319 508 PANTHER F20B24.21 1 505 - -
Cca02g00319 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00319 Cca-Chr2 6393002 6403737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00319 13 306 C3H Transcription Factor Family AT3G10810 54.730 9.18e-88 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00319 - - gmx:100818532 695.656