Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00316 ATGGGAATAGAGATTCCGGAGCCTAACACGTGCGTTAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCATCTCCCTCCCTCTTCTTATGCTATCTCCTCGCCCATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGTGTGAGGGTTGCTGTGAAGAAACCCATTTTGTCTACTTCTGAAGACATCAATAAATTCCATAAAGAATTGCAATTGCTATGCAAGTTAGATCATCCGGGAATAGCGACACTAATTGCAGCCCATGCAAAACCACCCAATTACATGTTTTTCTTCAAGTTATATGAATCTCTGAATCTTGCACAGAAGTTACACGTGGAAGAGTGGATCCCAACTCTCAATGATGCACTTATGATAGCAATCCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAATCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTACCGCGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTGCATACAGAAAAGTCAGATGTATACAGTTTTGGGATAACTGTCAATGAACTTCTTACTGGTGTTGTGCCATATACTGATCTTCGTACAGAAGCACAGGCCCACACAGTGCTTGAGATGAACTATACTGAGCAGCAATTAACAGCAGCTGTTGTTTCTGATGGATTACGGCCAGTCATTGCTACTGAGGACTCGGGTATACCTACAAGATTATTATCAATGATACAAAAATGTTGGGATTCAAATCCTAATAACAGACCTGCTTTTGATGACATTGTCAAGGAACTTGGTTTAATTAAGGAGAGTGGTAAGTTAGAGAAGGCAGAAGATATTCATATCAGACCTTGTAACTTGCATGTTGATCAACCCGTGGACAAGACTGATCACCTTTTGGCTTATCAAGAGAGTTTTAGCTGGTCTACTCTTGGTGAACTTTTGGTCAGGAGTGGCTCTACTGCAAAAGATTCTGGTTTGATAACTAAGCGTGAGTCTTATGATGAACCTTCAGTATACCATCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCATATTTGCGGCGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTTTAGAGCTGTGCCAGCAGTTTTGCAGACTTTAAGTTTTATGGGCAGTCCTGCTAAAGCACTAGCGGAAGCATTCATTAGTACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAATCCAGAAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTACTTCTCTTATAGTTAGGAACAAACTATTTGTTGCTAACATTGGTGATTGTAGGGCAATCTTATGTCGTGCTGGTAGTCCAATTGTTCTAAGTAAGGATCACGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTTGTCAGGGGGGGCATGTACATTGGCAAGTTGATACTTGGAGAGTCGGTCTTCCTGCACTTCAGGTTACTCGTTCAATTGGTGATGATGATCTCAAGCCTGCTGTAACTGCAGAACCTGAGATAACTCAGAATACCTTATGTGCAGAGGATGAATTTCTGGTCATGGCTAGCGATGGCCTCTGGGATGTCATAAGCAGTATGGAGGTCATAAATATAATTAAAGACACCGTTAAAGAGCCGGGAATGTGCTCTAAGAGGTTGGCTACTGAAGCTGTGGAACGTGGCAGCAAAGATAACATCACAGTTATCGTTGTTTTCTTACGTCCTGTGTCTACAGCGGAGAGAATTTATTAG 1977 0.4264 MGIEIPEPNTCVRGCCTSPSIPLHLPPSSYAISSPIARGAESVVYEGTLDGVRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESLNLAQKLHVEEWIPTLNDALMIAIQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKNDLKGVSTANWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGITVNELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSDGLRPVIATEDSGIPTRLLSMIQKCWDSNPNNRPAFDDIVKELGLIKESGKLEKAEDIHIRPCNLHVDQPVDKTDHLLAYQESFSWSTLGELLVRSGSTAKDSGLITKRESYDEPSVYHPILSWGSYATCGRRETMEDTHFILPHICGEKDVYAFGIFDGHRGAAAAEFSFRAVPAVLQTLSFMGSPAKALAEAFISTDAAFRKELDSYRKSRRCIQKDWHPGCTAITSLIVRNKLFVANIGDCRAILCRAGSPIVLSKDHVASCLQERERVICQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITQNTLCAEDEFLVMASDGLWDVISSMEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00316 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Cca02g00316 658 CDD PP2Cc 393 648 IPR001932 -
Cca02g00316 658 Pfam Protein kinase domain 32 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00316 658 PANTHER - 1 658 - -
Cca02g00316 658 SUPERFAMILY PP2C-like 383 650 IPR036457 -
Cca02g00316 658 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Cca02g00316 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Cca02g00316 658 Gene3D - 384 653 IPR036457 -
Cca02g00316 658 ProSiteProfiles Protein kinase domain profile. 30 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00316 658 PANTHER PROTEIN PHOSPHATASE 2C 1 658 IPR015655 GO:0004722|GO:0006470
Cca02g00316 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00316 658 SMART PP2C_SIG_2 406 648 IPR001932 -
Cca02g00316 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cca02g00316 658 SMART PP2C_4 381 646 IPR001932 -
Cca02g00316 658 Gene3D Transferase(Phosphotransferase) domain 1 22 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00316 Cca-Chr2 6305356 6317159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00316 99 658 PP2C-type Phosphatase Gene Family AT2G40860 63.636 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Cca02g00316 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00316 - - gmx:100785390 1186.4