Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00311 ATGGCATTTTCCAAACTCCATGCAATAATAGAAAATGTTGGAAGTTGTTGGAAAACCACCAAAGGCTTCACCCTCCAAGTTCTTACAGGGCGTTGGTTCATGGCGTTCTCCTCATTCATGCTCATGTCAGTATCAGGAGCAAGCTACATGTTTAGTCTATACTCAAGGGAAATCAAGTCAGTTTTGGGGTATGACCAATCCACCCTCAATCTCTTAAGCTTCTTCAAGGACTTGGGCTCTAACGTAGGCATTATTTCAGGCCTAATCAATGAGGTCACACCCCCTTGGGTCGTCTTAACACTTGGTGGGGTTCTCAACTTTTTTGGCTATTTCATGATTTGGCTTGTAGTGACCACAAAAATATCCAAGCCCCAAGTGTGGAACATGTGCTTGTACATCTTCATTGGAGCCAATTCTCATTGTTCCACTGACACTGGAATCATTGTCACCAGTGTAAAGAACTTCCCATGCAGCAGGGGCATTGTAATTGGCATTTTGGTTATCAGGCACCACAAGGGAGTTGTACAGCCAAATGATTCCAAGGTTTTCTATAATTTCCTCTATACCACTTTAGTCCTTGCAAGTTTCCTCTTGGTAGTGATCGTATTGCAAAAAAGTTTCACTTTTACGAAGAGTGAGTATTATGTCACTAGTTCTCTAATGCTTCTCTTGCTCATCCTGCCACTTGCTGTTGTTTTGGTTGAAGAACAAAAGATATGGAAGAGGAAACAAGAAAACATCAATACTGAAAACCCTCCTAAGCCTTTGAATATAACAACCGAAAAGCCAAATCTAGAGAAGCCTGCAAAGGCTACACCAAAGCAAGTTTCCTGTTGGAAAAACATGTTGAGGCCACCAAGTAGAGGTGAAGATCATACAATATTTCAAGCCCTTTTTAGCCTTGACATGGTGATTCTTTTCTTAGCCACAATTTGTGGACTTGGAGGTACCCTCACTGTGGTAAATAACTTGAGTCAGATTGGTGCATCTTTAGGATATTCAGGGCATAGTATAACCACATTTGTGTCCCTTATGGCCATTTGGATTTATATGGGTAAAACTGTGGAGGGACTAGTGTCAGATATTATCATAACCAAATTTAAAGTCCCTAGGCCTCTCGTACTAACATTAATCTTTGTGTTACCTTGTGTTGGTTACCTACTAATTGCTTTCAATGTCCCAAATGGTCTCTATGCAGCCTCGATTATAATTGGTTTCTGCTTTGGGGCAACCTGGACTGTAATATTTTCCATTATATCTGAACTTTTTGGTCTTAAATTTTACTCAACGTTGAGTAATGTTGGGGCAGTGGCAAGTCCAATTGGGTCATATTTGTTCAGTGTAAGGCTTGCAGGGCATTTTTATGACAAGGAAGCCACAAGGCAAATGGAAGCATTAGGACTAAAGAAGAAACCAGGGGAGGAGTTGAATTGCAACGGGAGTGAGTGTTACAGAAAGGTTTTCTATATAATCACTGCATTTAGCTTGGTTGGGGCACTTGTGTCTCTGATCTTGGTGCTAAGGACTAGAGAGTTCTATAAAGGTGACATATACAAGAAGTTCAGAGAGGATGTTAGAATTGCTGAAGCTGAAAATGGTGTGAATCAGAACAAGATTGGACAACCTGCTACAAATAAAGGATAG 1644 0.4075 MAFSKLHAIIENVGSCWKTTKGFTLQVLTGRWFMAFSSFMLMSVSGASYMFSLYSREIKSVLGYDQSTLNLLSFFKDLGSNVGIISGLINEVTPPWVVLTLGGVLNFFGYFMIWLVVTTKISKPQVWNMCLYIFIGANSHCSTDTGIIVTSVKNFPCSRGIVIGILVIRHHKGVVQPNDSKVFYNFLYTTLVLASFLLVVIVLQKSFTFTKSEYYVTSSLMLLLLILPLAVVLVEEQKIWKRKQENINTENPPKPLNITTEKPNLEKPAKATPKQVSCWKNMLRPPSRGEDHTIFQALFSLDMVILFLATICGLGGTLTVVNNLSQIGASLGYSGHSITTFVSLMAIWIYMGKTVEGLVSDIIITKFKVPRPLVLTLIFVLPCVGYLLIAFNVPNGLYAASIIIGFCFGATWTVIFSIISELFGLKFYSTLSNVGAVASPIGSYLFSVRLAGHFYDKEATRQMEALGLKKKPGEELNCNGSECYRKVFYIITAFSLVGALVSLILVLRTREFYKGDIYKKFREDVRIAEAENGVNQNKIGQPATNKG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00311 547 Pfam Nodulin-like 174 232 IPR010658 -
Cca02g00311 547 Pfam Nodulin-like 31 167 IPR010658 -
Cca02g00311 547 Gene3D MFS general substrate transporter like domains 299 514 IPR036259 -
Cca02g00311 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 166 - -
Cca02g00311 547 PANTHER MFS TRANSPORTER 13 166 - -
Cca02g00311 547 PANTHER MFS TRANSPORTER 167 544 - -
Cca02g00311 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 167 544 - -
Cca02g00311 547 SUPERFAMILY MFS general substrate transporter 222 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00311 Cca-Chr2 6236243 6238015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00311 19 523 Nodulin-like Gene Family AT2G39210 54.107 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00311 - - gmx:100789645 876.315