Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00260 ATGGCCAGTAGTGTTAACACTTCACCTCTAATTTTACCAGTTGGTATCAAAATTCAGCCTCAAGCTCATGTTAAGCATACTGGACCAAACATTGTTGGGATGAAACCCTTACCATATAACATTAGGAAGGAAGATCGTATGATTTCTACATTACAAAGTCCATCATCTCATATCACATGTGCTGCTGCTTTGGATACTAAATGTGCTGCAACTGCAAGTGCAACCCAAACAGTAACCCGCAATGCTCGGTCAATGACTATTACTCCTGACAAAGTTAAGTCCCCTCAACTTGATAACAATGGACCTGGACTGCCACCTCGTGACGATGATGGTGATGGTGGCAATGGAGGAGGTGGAGGTAAGTTTTCGGGTGGACTCCAGCTTTTGGGTATTCTTGGTATCCTAGATGTTCTAAAGGACATTGAGAATCAATGGCAACGCAAGCACAAGAGACGATCTTGA 462 0.4329 MASSVNTSPLILPVGIKIQPQAHVKHTGPNIVGMKPLPYNIRKEDRMISTLQSPSSHITCAAALDTKCAATASATQTVTRNARSMTITPDKVKSPQLDNNGPGLPPRDDDGDGGNGGGGGKFSGGLQLLGILGILDVLKDIENQWQRKHKRRS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00260 153 MobiDBLite consensus disorder prediction 79 95 - -
Cca02g00260 153 MobiDBLite consensus disorder prediction 79 121 - -
Cca02g00260 153 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 1 150 IPR040299 -
Cca02g00260 153 PANTHER - 1 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00260 56 118 C2H2 Transcription Factor Family AT1G56200 47.692 2.37e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00260 - K00600 gmx:100781669 158.688