Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00258 ATGAAAGGCAATAATACACTTTTGTTGAATTTATTCTACACTTTCTTACTGTTTCTTGGAGCTTCAAGCTCATCAGAATCAGGGAATGGTGGCAATAGTGACGAAGTTTATATAGTGTATATGGGAGCCGCGGATTCAACAAAGGCTTCTCTTCGGAATGACCACGCTCATCTTTTGAATTCGGTGCTTAGAAGGAATGAGAAGGCTCTAGTAAGGAACTATAGACATGGGTTCTCAGGGTTTGCAGCTCGTCTAACAAAAGAGGAAGCGACATCAATTGCTCACGAACCTGGTGTCGTCTCTATTTTCCCTGACCCCATTCTCAAGCTCTACACTACACATTCTTGGGATTTCCTTAAAGACCAATCTCGGTTCAAAATCAACACCAAACCAGACATAGTCTCCAGCTCTTCTTCCACATCAGACGTCATCCTTGGCATATTAGACTCAGGAATAAGGCCAGAGTCGGCGAGTTTTAGCGACAAGGGTATGGGTCCTATTCCATCTCGTTGGAAGGGCATTTGCATGAAATCCCAAGACTTCAATTCCTCTAACTGTAACAGGAAGCTAATTGGCGCAAGGTATTATGTTAACCCTAATGGGGACAAAAATGAGAACACACCAAGGGACTCATTGGGTCACGGGACCCACGTGGCGTCGACGGCGGTGGGTGCCGCCGTGAAAAACACATCGTACTATGGTCTTGCGGCGGGGACCGCGACGGGTGGGTCCCCAAATACAAGATTGGCGGTTTACAAAGTGTGTTCGACAATTGGGTGTTTTGGTTCGGGCATTTTAGCGGCGTTTGACGATGCCATTGCCGACGGAGTGAACTTGTTGTCTCTGTCGCTCGGTGGTTCCCCTGGAGCCATATCGGACTTCACGACGGACCCCATTGCGATCGGAGCATTCCACGCCATGGAGCACGACATCCTGGTGGTGTGCGCCGCAGGGAATAATGGTCCAACTTCGAACACGGTTGTCAACGACGCACCTTGGATTTTTACCGTTGCTGCTTCCACCATTGACCGAGATTTCCAATCCTCCGTTGTCTTGGGTAATAACAGCACCATCAAGGGAAAAGCCATAAATTTCTCTCCTCTCTCAAATTCTCCAAAATATCCATTGATATATGCTGAGGCTGCCAAGGCAAATAGCGCAACCTTAATTGAAGCAAGACAATGCCACCCAGATGCATTAGATGCAACTAAAGTTAAAGGAAAGATAGTCGTTTGTGATGGAAAAACTGATCATGAAGCATTTATCACTAAAGATAAAGTTGATACTGTAGAAATGGCGGGAGGAATAGGTTTGGTTCATATTACTGATGAAGAAAAAATAGCAACAAAATATGTGGACTTCCCAACAACGGTGATAAGTTCAAATGATAGTGTCAAAATTATTCAATATCTCAATTCAACAAGCAATCCAACGGCGACAATTCTTCCAACAGTTACAACTCTTGATTATAAGCCTGCTCCTGTGGTGCCAATCTTTTCATCAAGAGGGCCTTCACAGCTTTTTAGCAATATTCTCAAGCCTGATATTGCAGCACCGGGAGTTAATATTCTTGCAGCATGGATTGAAAATAGTGAAGAAGAGGTTCCAAAAGGAAGAAAGCCCTCATTATACAACATGATCTCAGGGACTTCCATGGCCACTCCACATGTTTCAGGGCTTGCAAGTAGCATCAAAACACAAAACCCTACTTGGAGTGCATCTGCAATCAAATCGGCCATCATGACTACAGcaattcaaaacgacaacttgaaggctcccataacaacagattcagggccagtagccacaccttatgactatggagcagTAAACTTCACTGGAAAAGGAGTTGTGAATGTGAGTAGAACTGTCACAAACGTTGGTGAAAAAGATGAAACAGTATACTCCTCCGTTGTCAATGCTCCTAGTGGAGTAAAGGCATCTGCTGGTCGAAGAACAATAGTTATGAAGTCAATTGAAAGGTTGAATAAGATCAATGAACAAGTTAGGAAAAGGAAAAATAATGTTGAAACCATGTGA 2040 0.4235 MKGNNTLLLNLFYTFLLFLGASSSSESGNGGNSDEVYIVYMGAADSTKASLRNDHAHLLNSVLRRNEKALVRNYRHGFSGFAARLTKEEATSIAHEPGVVSIFPDPILKLYTTHSWDFLKDQSRFKINTKPDIVSSSSSTSDVILGILDSGIRPESASFSDKGMGPIPSRWKGICMKSQDFNSSNCNRKLIGARYYVNPNGDKNENTPRDSLGHGTHVASTAVGAAVKNTSYYGLAAGTATGGSPNTRLAVYKVCSTIGCFGSGILAAFDDAIADGVNLLSLSLGGSPGAISDFTTDPIAIGAFHAMEHDILVVCAAGNNGPTSNTVVNDAPWIFTVAASTIDRDFQSSVVLGNNSTIKGKAINFSPLSNSPKYPLIYAEAAKANSATLIEARQCHPDALDATKVKGKIVVCDGKTDHEAFITKDKVDTVEMAGGIGLVHITDEEKIATKYVDFPTTVISSNDSVKIIQYLNSTSNPTATILPTVTTLDYKPAPVVPIFSSRGPSQLFSNILKPDIAAPGVNILAAWIENSEEEVPKGRKPSLYNMISGTSMATPHVSGLASSIKTQNPTWSASAIKSAIMTTAIQNDNLKAPITTDSGPVATPYDYGAVNFTGKGVVNVSRTVTNVGEKDETVYSSVVNAPSGVKASAGRRTIVMKSIERLNKINEQVRKRKNNVETM 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00258 679 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 613 IPR045051 -
Cca02g00258 679 Pfam PA domain 374 463 IPR003137 -
Cca02g00258 679 Gene3D Peptidase S8/S53 domain 142 609 IPR036852 GO:0004252|GO:0006508
Cca02g00258 679 Pfam Subtilase family 141 596 IPR000209 GO:0006508|GO:0008236
Cca02g00258 679 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Cca02g00258 679 SUPERFAMILY Subtilisin-like 133 624 IPR036852 GO:0004252|GO:0006508
Cca02g00258 679 ProSitePatterns Serine proteases, subtilase family, histidine active site. 214 224 IPR022398 -
Cca02g00258 679 ProSiteProfiles Serine proteases, subtilase domain profile. 115 624 - -
Cca02g00258 679 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 54 613 - -
Cca02g00258 679 Gene3D - 343 488 - -
Cca02g00258 679 CDD Peptidases_S8_3 108 585 IPR034197 -
Cca02g00258 679 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Cca02g00258 679 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Cca02g00258 679 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cca02g00258 679 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cca02g00258 679 Pfam Peptidase inhibitor I9 36 110 IPR010259 -
Cca02g00258 679 Coils Coil 659 679 - -
Cca02g00258 679 CDD PA_subtilisin_like 349 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00258 Cca-Chr2 5288368 5294362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00258 22 613 Subtilisin-like Serine Gene Family AT1G20150 50.332 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00258 K25898 - gmx:100820194 912.138