Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca02g00228 | ATGGCTTATGCCATCTCAGAGACAGATGCTGCCATGGCTCCAAAAGTAGTAGATGGGGAGGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATACCACCTTTATGTTCACAGATACTTGCACTATGGTTTACTAGCTGCTCGTGCTGAGATTTTAAAGGTTTCTGAAGATGCTGAAAACCCTTGTATCTTAACTGGCTACGATGGATCCTACAAATATGGTGGAAAGTCGTATAAAGCTTCATCCTCCTCCTCTGGAGCAAGCTTGAATGAATGCAAAAGTATTGCTCTTAAGGCTCTGAAAGTTAACGAGTCAACATGTACTCATATGAAGTGTACTTTTGGTGGGATATGGAATGGTGGAGGGGGGGATGGACAGAAGAACCTTTTTGTTGCCTCCTTTTTCTTTGACCGGGCTGCTGAGGTATTCATTAATTTATTTTAG | 450 | 0.4289 | MAYAISETDAAMAPKVVDGEDPYVKEMFLRGRKYHLYVHRYLHYGLLAARAEILKVSEDAENPCILTGYDGSYKYGGKSYKASSSSSGASLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEVFINLF | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca02g00228 | 149 | PANTHER | APYRASE-LIKE PROTEIN | 1 | 144 | - | - | |
| Cca02g00228 | 149 | Pfam | GDA1/CD39 (nucleoside phosphatase) family | 1 | 139 | IPR000407 | GO:0016787 | |
| Cca02g00228 | 149 | Gene3D | Exopolyphosphatase. Domain 2 | 1 | 148 | - | - | |
| Cca02g00228 | 149 | PANTHER | ADENOSINE/GUANOSINE DIPHOSPHATASE | 1 | 144 | IPR000407 | GO:0016787 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca02g00228 | Cca-Chr2 | 4642137 | 4642963 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca02g00228 | 1 | 143 | Calmodulin-binding Proteins | AT3G04080 | 76.923 | 9.31e-69 | 213 |