Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00228 ATGGCTTATGCCATCTCAGAGACAGATGCTGCCATGGCTCCAAAAGTAGTAGATGGGGAGGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATACCACCTTTATGTTCACAGATACTTGCACTATGGTTTACTAGCTGCTCGTGCTGAGATTTTAAAGGTTTCTGAAGATGCTGAAAACCCTTGTATCTTAACTGGCTACGATGGATCCTACAAATATGGTGGAAAGTCGTATAAAGCTTCATCCTCCTCCTCTGGAGCAAGCTTGAATGAATGCAAAAGTATTGCTCTTAAGGCTCTGAAAGTTAACGAGTCAACATGTACTCATATGAAGTGTACTTTTGGTGGGATATGGAATGGTGGAGGGGGGGATGGACAGAAGAACCTTTTTGTTGCCTCCTTTTTCTTTGACCGGGCTGCTGAGGTATTCATTAATTTATTTTAG 450 0.4289 MAYAISETDAAMAPKVVDGEDPYVKEMFLRGRKYHLYVHRYLHYGLLAARAEILKVSEDAENPCILTGYDGSYKYGGKSYKASSSSSGASLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEVFINLF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00228 149 PANTHER APYRASE-LIKE PROTEIN 1 144 - -
Cca02g00228 149 Pfam GDA1/CD39 (nucleoside phosphatase) family 1 139 IPR000407 GO:0016787
Cca02g00228 149 Gene3D Exopolyphosphatase. Domain 2 1 148 - -
Cca02g00228 149 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 144 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00228 Cca-Chr2 4642137 4642963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00228 1 143 Calmodulin-binding Proteins AT3G04080 76.923 9.31e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00228 K14641 - ccaj:109813162 271.552