Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00222 ATGATTTCTCTAAATCTAAACTCGTGGCATCTCCTCCATTTACTTACATGTGTTCTTCTTCTGACTCAGACATATTCTGAGGATGAGCGAAAGACCTATATTGTGTACATGGGTGATCATCCCAAAGGCAACGTTCAATCTTCAGAATTACTTCACATGAGTATGCTTCAAAATATCCTCGCCAGCCAATTTGCACCAGATGTTTTGCTACATAGCTACAAGAAGAGTTTTAATGGATTTGTTGCAAAGCTAACAGAAGAGGAAGCAGTGAGAATGTCAGGATTGGATGGTGTGGTTTCGGTTTTCCAAAACAAAAAAAATAAGCTGCAGACAACAAAGTCTTGGGACTTCATAGGCTTCTCTGAGAATGTCAACAGAGCAAGTATAGAGAGCGACATAATTGTTGGAGTAATAGATTTCGGAATTTGGCCTGAGTCTGATAGTTTTAGTGACAAAGGATTCGGTCCACCGCCAAAGAAATGGAAGGGCACTTGCCATAACATCACCTGCAACAACAAAATTATTGGAGCAAAATATTTTCGCATACATGGTACATTTGGAAATGACATCATATCTGCAAGGGATTCAAGTGGCCATGGTACTCACTGTGCATCCATTGCTGCTGGGAACTTAGTTGAGTCCACAAGTTTTTTTGGACTTGCCTCAGGAACAGTGAGAGGTGGAGTTCCATCAGCACGCATTGCTGTGTACAAACCTTGTTGGTCCTCAGGTTGTTATGATGCTGACATCCTTCAAGCCTTTGATGAAGCCATTGAAGATGGTGTTGACATCTTCTCCATTTCCCTAGCACCTAGAACGGTAGTATTCAGCGACTATTTCGAAGATGTATTCGCCATAGGGGCTTTCCATGCAATGAAGAAAGGGATATTAACATCACATGCTGCTGGTAACTTTGGTCCAGATCTTTATACAATATCTAGTAATGCACCATGGTTACTTTCTGTAGCTGCCAGCACTATAGACAGAAAGTTTTTTACTCGTGTTCAGTTGGGTGATGGCACCGTCTACGAGGGAGTTTCAATAAATTCATTTGATCTGAACAATGAAAGTTATCCGTTAATTTATGCCGGAGATGCACCCAACTTAACTGGTGGACACAATAGTTCTGTATCCAGGTTTTGTGTCGAAAGTTCATTAGATGAAGATTTGGTGAAGGGGAAGATTGTTTTATGCGATATTTCTGAAGGTACTTCATTTGAGGGATTGATTTCTAAGGTAGCTGGTATTCTTGTAAGAAGTATATCGCCGAAAGATGTCTCAGACATATTTGCATTGCCAATGGTTAGCCTTACCCAAAAAGATGGGATACTCATACAGTCTTACATAAATTCAACAAGTAATCCAACAGCCATTATATTTAAGAGTAATGAAGGCAAAGATTCATTATCCCCTTACGTGGCTTCATTCTCATCTAGAGGTCCAAATGCAATTACTTCAGACATTCTTAAGCCTGATCTAGCTGCTCCAGGAGTTGGCATTTTGGCTGCATGGTCTCCAATTGCTTCTGTTTCTATGTCTAAAGATGATAAGAGAAAAGTAAATTATAATATACTGTATGGTACATCAATGGCATGCCCTCATGTTACTGCAGCAGCTGCCTATATCAAATCATTTCATCCTGATTGGTCTCCGGCAACAATCAAATCAGCATTAATGACTACTGCTACCCCAATGAGTTCCGCACTTAATCCTGAAGCTGAATTTGCTTATGGTGCGGGACAAATTGACCCTATTAAGGCAGTGAGTCCTGGCTTAGTATATGATGCCAATGAAATTGATTATGTCAAGTTTTTGTGTGGCCAAGGTTATGATGCTAAGAAGATAAGAACTATTACAGCTGATAATAGCAGTTGTACACAAGACAACATTGGAACCGTTTGGGATCTAAATCTCCCATCTTTTGCGCTCTACATGAACACCTCAACACCTTTTACTCACGTTTTTCATAGAACTGTTACCAATGTTGGATCCGCTACATCAAAATATAGAGCTAGAGTAACTATACCTCCTTCCTTGTTGAACTTTAAAGTGGAGCCAGATGTTTTGTCCTTTTCATCTGTGGGTCAAAAGAAGTCATTCACTCTTACCATTGAAGGGATAATTAATGTGGGTATAGTTTCTTCTTCTTTGATTTGGGATGATGGCACTTTCCAAGTAAGGAGCCCTATTGTTGTGTACTTTGAATAA 2208 0.3986 MISLNLNSWHLLHLLTCVLLLTQTYSEDERKTYIVYMGDHPKGNVQSSELLHMSMLQNILASQFAPDVLLHSYKKSFNGFVAKLTEEEAVRMSGLDGVVSVFQNKKNKLQTTKSWDFIGFSENVNRASIESDIIVGVIDFGIWPESDSFSDKGFGPPPKKWKGTCHNITCNNKIIGAKYFRIHGTFGNDIISARDSSGHGTHCASIAAGNLVESTSFFGLASGTVRGGVPSARIAVYKPCWSSGCYDADILQAFDEAIEDGVDIFSISLAPRTVVFSDYFEDVFAIGAFHAMKKGILTSHAAGNFGPDLYTISSNAPWLLSVAASTIDRKFFTRVQLGDGTVYEGVSINSFDLNNESYPLIYAGDAPNLTGGHNSSVSRFCVESSLDEDLVKGKIVLCDISEGTSFEGLISKVAGILVRSISPKDVSDIFALPMVSLTQKDGILIQSYINSTSNPTAIIFKSNEGKDSLSPYVASFSSRGPNAITSDILKPDLAAPGVGILAAWSPIASVSMSKDDKRKVNYNILYGTSMACPHVTAAAAYIKSFHPDWSPATIKSALMTTATPMSSALNPEAEFAYGAGQIDPIKAVSPGLVYDANEIDYVKFLCGQGYDAKKIRTITADNSSCTQDNIGTVWDLNLPSFALYMNTSTPFTHVFHRTVTNVGSATSKYRARVTIPPSLLNFKVEPDVLSFSSVGQKKSFTLTIEGIINVGIVSSSLIWDDGTFQVRSPIVVYFE 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00222 735 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Cca02g00222 735 CDD PA_subtilisin_like 335 459 - -
Cca02g00222 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Cca02g00222 735 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Cca02g00222 735 Gene3D Peptidase S8/S53 domain 132 601 IPR036852 GO:0004252|GO:0006508
Cca02g00222 735 PANTHER PUTATIVE-RELATED 21 733 - -
Cca02g00222 735 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Cca02g00222 735 ProSiteProfiles Serine proteases, subtilase domain profile. 114 588 - -
Cca02g00222 735 CDD Peptidases_S8_3 108 563 IPR034197 -
Cca02g00222 735 Gene3D - 605 734 - -
Cca02g00222 735 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cca02g00222 735 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Cca02g00222 735 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Cca02g00222 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 733 IPR045051 -
Cca02g00222 735 SUPERFAMILY Subtilisin-like 109 592 IPR036852 GO:0004252|GO:0006508
Cca02g00222 735 ProSitePatterns Serine proteases, subtilase family, histidine active site. 199 209 IPR022398 -
Cca02g00222 735 Gene3D - 328 466 - -
Cca02g00222 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00222 Cca-Chr2 4503969 4540584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00222 29 733 Subtilisin-like Serine Gene Family AT5G59100 49.791 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00222 - - gmx:100801111 1135.17