Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00221 ATGAGAAATTCTACGTCGGATCGCCATCAGCCTCCAACCACACCCAAAACCGTTCTCCTAGCGGAAGGCGGCCTCCTCCTCCGCGTCCTCGACTCCGGAAGCACCTTCGCCATTGAAAAGGCATGCATAGCGCTTCAGGCGCTCAGCTTAACCAAGGACAACGCCAGAGCCATCGGTTCCCGTGGCAGAATCTCCTCGCTCCTTGTGATTTGCCAGGCTGGCACCCCCGGCACGCAGGCCTCTGCCGCCGCCGTGCTAAAGAACCTCGCTGCCTTTTCCGAAATCAGAGACAATTTCGCCGAGGAGAACGCGATGGTGGTTTTGCTCGCTTTAGCCTCCTCCGAAATCGCTTCTGCGCGGAAAGATGATAGAGAAGCGCTTTACTTTGCAAAGAGAATGATGAAAAACCCGCACGTGAGGCTCACCGTGGTGAGGTTTTTGGCCTCCACGAAGGAGGAAAACCCTAAGGTGAAGGATTGGCAGGAAATGCTTGACACGAAGATTTTGAATGATAGGAAGAGTAAGAAGGAGACAAGCTGGGATTGA 546 0.5421 MRNSTSDRHQPPTTPKTVLLAEGGLLLRVLDSGSTFAIEKACIALQALSLTKDNARAIGSRGRISSLLVICQAGTPGTQASAAAVLKNLAAFSEIRDNFAEENAMVVLLALASSEIASARKDDREALYFAKRMMKNPHVRLTVVRFLASTKEENPKVKDWQEMLDTKILNDRKSKKETSWD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00221 181 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 122 - -
Cca02g00221 181 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 15 122 - -
Cca02g00221 181 Gene3D - 15 159 IPR011989 -
Cca02g00221 181 SUPERFAMILY ARM repeat 25 157 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00221 Cca-Chr2 4499821 4500690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00221 121 174 Antiporter Super Family AT3G44900 46.296 3.73e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00221 - - pvu:PHAVU_009G163700g 149.828