Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00220 ATGCTTGAGGGGCTTTGGAACAGTTCAGGAAGCAGTAAGTGGATTTTTTGGTTGCAACAGGTGTGGCTACCCGTCAATCTGGAGGACATAAGGAGGGAGGCGCAGACCATGAGCCTCATCGACCACCCCAACGTCGTCAAGGCCTTCTGCTCCTTCGTCGTCGACAAGAGCCTCTGGGTCGTCATGGGCTTCATGGCGCAGGGCTCGGCCGTTGGAATCGAGAAGAATATTGCCGGCCTTAACATCGCGGTGAACGTGGCAGTGTCGGTGGAGATAGTCAAGAGCCTTGAGAGTGTCCTTGAGGATAGATCCGATGGCGTCCTCCTCGAATCCCTCGGGATAGGCGGCCTTCCTGGGGGGtaa 363 0.5647 MLEGLWNSSGSSKWIFWLQQVWLPVNLEDIRREAQTMSLIDHPNVVKAFCSFVVDKSLWVVMGFMAQGSAVGIEKNIAGLNIAVNVAVSVEIVKSLESVLEDRSDGVLLESLGIGGLPGG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00220 120 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 25 71 - -
Cca02g00220 120 Gene3D Phosphorylase Kinase; domain 1 20 67 - -
Cca02g00220 120 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 25 71 - -
Cca02g00220 120 SUPERFAMILY Protein kinase-like (PK-like) 24 97 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00220 Cca-Chr2 4498132 4499686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00220 26 75 MAP Kinase Kinase Kinase Kinase AT4G24100 76.000 1.09e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Cca02g00220 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00220 - - ccaj:109789057 93.5893