Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00204 ATGGGAATCTCTGTTGTGAGTAGCGATTTACTGAGTCAGAAAGCTTCAGCCATGAGAGACTCTCTGGAGAAAAGCCAAACCATCACACACGACGTCGTTTCGATTCTCGGCTCCTTCGATCACCGCCTCTCCGCCCTCGAAACCGCCATGCGCCCTACCCAGATCAGAACGCATTCTATTAGGAAAGCTCACGAGAATATTGATAGGACTTTGAAGACTGCTGAGGCTATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCCAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGCAATAAGAAGGGTTTTAAGAGTGATGATAGTATTGTCATCCATGCCAATAATTTGATATCCGAAGCTATTTCTAAGCTAGAAGATGAGTTTGAGCGGCTATTATCATCTTACAGTAAACCTGTTGAACCTGAGCGCCTCTTTGGTTGTCTTCCAAACTCAATGCGGCCTTCATCACCAGGTCATGATGGTGATCCTAATGGAAAGAATCATTCTCCTAATCTCCATTCGGAGGCACATAAAAATAGTGCTGATGCTGTTTTATACACACCTCCTGTTCTTATACCACCAAGAATTTTGCCATTGCTCAATGATTTAACCAAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTTAAAATATACAGAGATACCCGTTCTAATGTATTGGAAGAAAGTCTGCAAAAGCTTGGAGTTGAGAAACTCAGCAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTAGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGGTGAACGGAAAGTCTGTGATCAGATATTTGAAGGATTTGACACACTTAGTGATCAGTGTTTTGCTGAAGTAACTATAAACAGCATTTCCATGCTGCTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGGTCACCTGAAAAGTTATTTGTACTTTTGGACATGTATGAAATATTGCAAGAGATCCATTCAGAGATTGATATGCTCTTTAAAGGCAGAGCTTGCACCAAAATAAGAGAAGCTGTAACGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACCAAGACTGCAGTGACTGATGGAACTGTTCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGCTCTACCTTAAACCAACTTTTCCAAGGAATTGAAGGTGAAGGCTCACAGCTAGCGTTAGTGACATTGCGAATATTGCAAGCTCTTCAAATCAATTTAGATGGAAAATCAAAGCAATATAGAGACCCTGCTTTGACACACTTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCAAAGGATTTGTTGGGAGACGATTGGATTCAACGGCATAGGAAGGTTGTGCAGCAGCATGCCAATCAATACAAAAGAATCGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCCTCAGGTGGTGGTAGTAGCACTGCTGGTGCTGATGGGAGCAGTAGTGGCGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGACATTTAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGAGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTGAAACGATTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGATACATCAAATACACTGCTGAAGATCTGGAGCGAATCTTGGGTGAATTTTTTGAAGGAAAAAGCATAAATGATTCTAAGAGGTAA 1944 0.4069 MGISVVSSDLLSQKASAMRDSLEKSQTITHDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKTAEAILAHFDQYYQAEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKSDDSIVIHANNLISEAISKLEDEFERLLSSYSKPVEPERLFGCLPNSMRPSSPGHDGDPNGKNHSPNLHSEAHKNSADAVLYTPPVLIPPRILPLLNDLTKQMVQAGHQQQLLKIYRDTRSNVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDTLSDQCFAEVTINSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIDMLFKGRACTKIREAVTGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLNQLFQGIEGEGSQLALVTLRILQALQINLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKVVQQHANQYKRIAWAKILQSLSIQGLISSGGGSSTAGADGSSSGASRAIVKDRFKTFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYIKYTAEDLERILGEFFEGKSINDSKR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00204 647 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 643 IPR004140 GO:0000145|GO:0006887
Cca02g00204 647 SUPERFAMILY Cullin repeat-like 77 638 IPR016159 -
Cca02g00204 647 Gene3D Exocyst complex component Exo70 75 647 - -
Cca02g00204 647 MobiDBLite consensus disorder prediction 165 193 - -
Cca02g00204 647 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 643 - -
Cca02g00204 647 Pfam Exo70 exocyst complex subunit 278 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca02g00204 647 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00204 Cca-Chr2 4207979 4222765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00204 9 647 EXO70 exocyst subunit family AT5G03540 70.105 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00204 K07195 - gmx:100775958 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02313 03 44101950 44104624 Cca02g00204 02 4207979 4222765 PCT