Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00167 ATGCAATTCCCACAATCTTTTTTGTTCATTTTCATGTTGTTAGTAATTGCTTGCAGTGTCTGTGAGTCCCAAAATTGTACTAATCCACCCAAGACAATTACGGTTAGCAAGTCAGGCAAAGCAGATTTTCAAACAATTCAAAGTGCCATTGACTCTGTTCAAGGACAAAACTCTCAGTGGATTCACATCCAAATTTCTGCTGGTGTTTATTCAGAACAGGTCTTAATTCCAATGAACAAACCATGCATTTATCTAGAAGGAGCTGGTAGCAAATTAACGAGTATTGAATGGAGTGTCCATCCTAATCTTAGTGCCGCTTTTTATTCCCAAGCAAATAATACTATTGCAAGTGACATTACTTTCAAGAATACACTTAACTTGCCTATATCAGATGAAGATGCAAATATCACACAAGCTGTAGCAGCTCGAATTCATGGAGATAAATGCGCTTTTTTTAATTGTTCTTTTTTAGGGGTGCAAGACACCTTATATGATGAATATGGTCGTCATTATTATCGTAATTGCTATATTCAAGGTGGGATTGATTTCATATTTGGGAATGGTCAATCAATCTTTGAGGCAAGTCAATTATATTTTTCATTGGGAAAAAATGGTCCCATGAGGAATGGATGTTTTACGGCACAAGAAAGGAACTCACCAACTGATAGCAGTGGATTTGTTTTTAAAAATTGTAACGTGAGCGGGACAGGAGGACAGGCTCTACTAGGAAGATCTTTAAGGGCTTATGCAAGAGTCATCATAGCAAACTCATTCCTATCAGATGTCGTAGCACCCGAAGGTTGGAATGCTCGTACCTTTGTTGGCCATGAAGAAACCATTACATTTGTGGAGGCGGGAAATACAGGACCTGGAGCAAATATGTCAAAACGTGTGACTTGGTTGAAGCACATAAGTGGAGTTACACTTGATCAATTCTTAGATATCTCTTTTATTGATAAAGAAGGGTGGACTTCAAAATTGCCACCGAAGATCTTCATTTGA 1002 0.3802 MQFPQSFLFIFMLLVIACSVCESQNCTNPPKTITVSKSGKADFQTIQSAIDSVQGQNSQWIHIQISAGVYSEQVLIPMNKPCIYLEGAGSKLTSIEWSVHPNLSAAFYSQANNTIASDITFKNTLNLPISDEDANITQAVAARIHGDKCAFFNCSFLGVQDTLYDEYGRHYYRNCYIQGGIDFIFGNGQSIFEASQLYFSLGKNGPMRNGCFTAQERNSPTDSSGFVFKNCNVSGTGGQALLGRSLRAYARVIIANSFLSDVVAPEGWNARTFVGHEETITFVEAGNTGPGANMSKRVTWLKHISGVTLDQFLDISFIDKEGWTSKLPPKIFI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00167 333 PANTHER PECTINESTERASE 1 330 - -
Cca02g00167 333 SUPERFAMILY Pectin lyase-like 28 326 IPR011050 -
Cca02g00167 333 Pfam Pectinesterase 33 303 IPR000070 GO:0030599|GO:0042545
Cca02g00167 333 Gene3D - 30 331 IPR012334 -
Cca02g00167 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00167 Cca-Chr2 3219949 3223385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00167 9 277 Carbohydrate Esterase AT2G19150 46.909 8.99e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00167 - - aprc:113866591 480.33